Quantifying the determinants of evolutionary dynamics leading to drug resistance

G Chevereau, M Dravecká, T Batur, A Guvenek… - PLoS …, 2015 - journals.plos.org
… We provide evidence supporting that this small resistance variability strongly affects
evolutionary dynamics for nitrofurantoin, limits resistance development, and confines evolution to …

Evolutionary paths to antibiotic resistance under dynamically sustained drug selection

E Toprak, A Veres, JB Michel, R Chait, DL Hartl… - Nature …, 2012 - nature.com
… We analyzed the evolution of resistance in Escherichia coli under selection with single drugs,
… We measured the drug resistance of these libraries using an automated robotic system (…

Adaptive landscape by environment interactions dictate evolutionary dynamics in models of drug resistance

CB Ogbunugafor, CS Wylie, I Diakite… - PLoS computational …, 2016 - journals.plos.org
Evolutionary biology has focused the lens through which we study drug resistance in
microbes, helping to create a language to describe the evolutionary relationship between …

Evolutionary dynamics of complex networks of HIV drug-resistant strains: the case of San Francisco

RJ Smith, JT Okano, JS Kahn, EN Bodine, S Blower - Science, 2010 - science.org
… of the network of ARV-resistant strains (13). We calibrated the model… evolutionary dynamics,
from 1987 to 2008, of a network of ~4000 resistant strains, where each strain differed in drug

Integrating evolutionary dynamics into cancer therapy

RA Gatenby, JS Brown - Nature reviews Clinical oncology, 2020 - nature.com
… Attempts to disrupt the molecular mechanisms of resistance have generally been … evolutionary
dynamics of treatment-resistant cancer populations. We describe a variety of evolutionarily

Cancer systems biology in the genome sequencing era: part 2, evolutionary dynamics of tumor clonal networks and drug resistance

E Wang, J Zou, N Zaman, LK Beitel, M Trifiro… - Seminars in cancer …, 2013 - Elsevier
… Therefore, topics discussed in Part 2 of this review include evolutionary dynamics of clonal
… of clone–clone–stroma interactions for drug resistance. The ultimate goal of the future …

Evolutionary dynamics in cancer therapy

JJ Cunningham, RA Gatenby… - Molecular …, 2011 - ACS Publications
… “evolutionarily enlightened” cancer therapy. We suggest conceptualizing the evolutionary
dynamics of resistance … A key factor in the evolutionary dynamics of adaptation to any therapy (…

Population biological principles of drug-resistance evolution in infectious diseases

PA Zur Wiesch, R Kouyos, J Engelstädter… - The Lancet infectious …, 2011 - thelancet.com
… the usefulness of drugs not only requires cost-… evolutionary dynamics of pathogen resistance.
Mathematical and computational models of population biology and evolutionary dynamics

Distinct evolutionary dynamics of horizontal gene transfer in drug resistant and virulent clones of Klebsiella pneumoniae

KL Wyres, RR Wick, LM Judd, R Froumine… - PLoS …, 2019 - journals.plos.org
… Here we report the first comprehensive comparison of genome evolutionary dynamics in
multiple K. pneumoniae clones. We leveraged a curated collection of >2200 K. …

The evolutionary epidemiology of multilocus drug resistance

T Day, S Gandon - Evolution, 2012 - academic.oup.com
… required to predict the evolution of pathogens in response to drug pressure. Our results …
evolutionary dynamics, and illustrate how these feedbacks can be exploited to control resistance. …