Genetic Analysis of Variation in Gene Expression in Arabidopsis thaliana

M Vuylsteke, F Van Eeuwijk, P Van Hummelen… - Genetics, 2005 - academic.oup.com
… the dominance ratio revealed heterosis for expression for on average 9% of … expression
variation may contribute to a better understanding of its role in affecting quantitative trait variation

Genomic Survey of Gene Expression Diversity in Arabidopsis thaliana

DJ Kliebenstein, MAL West, H Van Leeuwen, K Kim… - Genetics, 2006 - academic.oup.com
… In this study, we assay natural variation in Arabidopsis gene expression on a genome-wide
basis in terms of which genes exhibit ELPs, how frequently these genes vary in their …

NATURALLY OCCURRING GENETIC VARIATION IN ARABIDOPSIS THALIANA

M Koornneef, C Alonso-Blanco… - Annu. Rev. Plant …, 2004 - annualreviews.org
… The analysis of Arabidopsis natural genetic variation is providing unique knowledge from …
The analysis of Arabidopsis natural variation for flowering time revealed the identity of several …

Genetic architecture of regulatory variation in Arabidopsis thaliana

X Zhang, AJ Cal, JO Borevitz - Genome research, 2011 - genome.cshlp.org
… common genetic variation controlling expression variation while … for diverse phenotypes
in Arabidopsis thaliana (Atwell et al. … resource to map gene expression variation in a diverse …

Effects of Gene Expression on Molecular Evolution in Arabidopsis thaliana and Arabidopsis lyrata

SI Wright, CBK Yau, M Looseley… - Molecular biology and …, 2004 - academic.oup.com
… (Duret and Mouchiroud 1999), we see a considerable increase (∼30%) in the frequency of
preferred codons across expression classes, and variation in gene expression level explains …

Global Analysis of Allele-Specific Expression in Arabidopsis thaliana

X Zhang, JO Borevitz - Genetics, 2009 - academic.oup.com
… of genetic variation in F 1 hybrids between two Arabidopsis thaliana wild … thaliana strains.
Quantitative assessment of 12,311 genes identified 3811 genes differentially expressed

Limited Contribution of DNA Methylation Variation to Expression Regulation in Arabidopsis thaliana

D Meng, M Dubin, P Zhang, EJ Osborne, O Stegle… - PLoS …, 2016 - journals.plos.org
… While we find support for methylation variation being a direct cause of expression variation,
and perhaps even stronger support for both types of variation being influenced by genetics …

Expression variation in connected recombinant populations of Arabidopsis thaliana highlights distinct transcriptome architectures

FA Cubillos, J Yansouni, H Khalili, S Balzergue… - BMC genomics, 2012 - Springer
… gene expression variation [3–5]. Comparison in Arabidopsis thaliana showed that at least
46% of the genes in the genome are differentially expressed between a pair of accessions [6]. …

Genomic approaches to analyzing natural variation in Arabidopsis thaliana

JN Maloof - Current Opinion in Genetics & Development, 2003 - Elsevier
… tools available for studying Arabidopsis thaliana are a great … the genetic basis of natural
variation. Abundant polymorphic … of expression profiling to natural variation in Arabidopsis will …

Impact of natural genetic variation on the transcriptome of autotetraploid Arabidopsis thaliana

…, T Rattei, KFX Mayer, A Gierl… - Proceedings of the …, 2010 - National Acad Sciences
… uniform genomes, suggesting lower alteration of gene expression. To evaluate the impact
of … of unique Arabidopsis thaliana autotetraploids by using different ecotypes. A. thaliana