The impact of endogenous content, replicates and pooling on genome capture from faecal samples
J Hernandez‐Rodriguez, M Arandjelovic… - Molecular ecology …, 2018 - Wiley Online Library
… captures significantly decrease the proportion of off-target reads from 34.15% after one
capture round to 7.83% after two capture … are advisable when using complex faecal samples. …
capture round to 7.83% after two capture … are advisable when using complex faecal samples. …
Whole mitochondrial genome capture from faecal samples and museum‐preserved specimens
… in capturing complete mitochondrial genomes from faecal samples, but observe reduced
capture … here that mitochondrial genome capture from field-collected faecal samples is a robust …
capture … here that mitochondrial genome capture from field-collected faecal samples is a robust …
[HTML][HTML] Whole genome sequences from non-invasively collected caribou faecal samples
… We compare four faecal genomes to two tissue genomes … Quality metrics were similar between
faecal and tissue samples … the capture method still does not give unbiased whole genome …
faecal and tissue samples … the capture method still does not give unbiased whole genome …
A roadmap for high‐throughput sequencing studies of wild animal populations using noninvasive samples and hybridization capture
… Specifically, after excluding the tissue-sample control libraries, we had 110 faecal sample
… that large-scale genomic studies are feasible for noninvasive samples through hybridization …
… that large-scale genomic studies are feasible for noninvasive samples through hybridization …
Maximizing the acquisition of unique reads in noninvasive capture sequencing experiments
C Fontsere, M Alvarez‐Estape, J Lester… - Molecular Ecology …, 2021 - Wiley Online Library
… of the whole genomic content of the samples, such as NGS, has … to capture the exome of 60
chimpanzee faecal samples as … targeted genomic regions may be increased in a collection of …
chimpanzee faecal samples as … targeted genomic regions may be increased in a collection of …
Genetic and genomic monitoring with minimally invasive sampling methods
… RNA baits to capture genomic DNA from faecal samples from 62 … genomic markers to
undertake pedigree reconstruction (Snyder-Mackler et al., 2016). Another study, using bait captures …
undertake pedigree reconstruction (Snyder-Mackler et al., 2016). Another study, using bait captures …
Urine as a high‐quality source of host genomic DNA from wild populations
… whole-genome capture MYBaits kit, we captured each sample according to the … faecal
samples to compare exome capture with whole-genome capture, and found that exome capture, …
samples to compare exome capture with whole-genome capture, and found that exome capture, …
[HTML][HTML] Methylation-based enrichment facilitates low-cost, noninvasive genomic scale sequencing of populations from feces
… To expand the utility of the enrichment protocol to all fecal DNA samples, we conducted a
series of capture experiments designed to optimize the enrichment of host DNA from “low-…
series of capture experiments designed to optimize the enrichment of host DNA from “low-…
Protocols for metagenomic DNA extraction and Illumina amplicon library preparation for faecal and swab samples
ATE Vo, JA Jedlicka - Molecular ecology resources, 2014 - Wiley Online Library
… used silica filter spin columns to bind and wash captured DNA. We aimed to improve upon
the … in bacterial 16S rRNA gene amplification success for faecal samples, the SPRI method …
the … in bacterial 16S rRNA gene amplification success for faecal samples, the SPRI method …
[HTML][HTML] A modified RNA-Seq approach for whole genome sequencing of RNA viruses from faecal and blood samples
… C virus whole genome sequence … samples from faeces and two Hepatitis C virus samples
from blood, on an Illumina MiSeq benchtop sequencer. More than 97% of reference genomes …
from blood, on an Illumina MiSeq benchtop sequencer. More than 97% of reference genomes …
相关搜索
- endogenous content genome capture
- degraded samples genomic data
- noninvasive samples hybridization capture
- evolutionary and ecological genomics targeted capture
- scat samples mitochondrial genomes
- capture hybridization mitochondrial genomes
- endogenous content faecal samples
- whole genome sequencing blood samples