Analysis of transcripts and splice isoforms in Medicago sativa L. by single-molecule long-read sequencing
Y Chao, J Yuan, T Guo, L Xu, Z Mu, L Han - Plant Molecular Biology, 2019 - Springer
… including 46,616 full-length ORFs, 1670 transcription factors from … long non-coding RNAs.
Our results show the feasibility of deep sequencing full-length RNA from alfalfa transcriptome …
Our results show the feasibility of deep sequencing full-length RNA from alfalfa transcriptome …
Full-length transcriptome of in Medicago sativa L. roots in response to drought stress
Z Fang, J Liu, X Wu, Y Zhang, H Jia, Y Shi - Frontiers in Genetics, 2023 - frontiersin.org
… utilized the SMRT sequencing to generate and identify full-length transcriptome of Alfalfa roots
… the transcriptome data, we analyzed the full-length transcriptome sequences, transcription …
… the transcriptome data, we analyzed the full-length transcriptome sequences, transcription …
Full-length transcript sequencing and comparative transcriptomic analysis to evaluate the contribution of osmotic and ionic stress components towards salinity …
… In this study, we constructed the first full-length transcriptome database for alfalfa root tips …
-Seq. This resulted in the identification of 52,787 full-length transcripts, with an average length …
-Seq. This resulted in the identification of 52,787 full-length transcripts, with an average length …
Small RNA deep sequencing identifies novel and salt‐stress‐regulated microRNAs from roots of Medicago sativa and Medicago truncatula
RC Long, MN Li, JM Kang, TJ Zhang… - Physiologia …, 2015 - Wiley Online Library
… Medicago, we used a high-throughput sequencing approach to analyze four small RNA
libraries from roots of Zhongmu-1 (Medicago sativa) and Jemalong A17 (Medicago … transcription …
libraries from roots of Zhongmu-1 (Medicago sativa) and Jemalong A17 (Medicago … transcription …
Comparative transcriptome investigation of global gene expression changes caused by miR156 overexpression in Medicago sativa
… Medicago sativa transcriptome using the Trinity program. a Summary of de novo assembly of
M. sativa transcriptome. … Transcript sequences of the aforementioned genes were obtained …
M. sativa transcriptome. … Transcript sequences of the aforementioned genes were obtained …
Development and characterization of simple sequence repeat (SSR) markers based on RNA-sequencing of Medicago sativa and in silico mapping onto the M …
Z Wang, G Yu, B Shi, X Wang, H Qiang, H Gao - PLoS One, 2014 - journals.plos.org
… The longer the SSR repeats were, the higher the rate of polymorphism in transcripts was …
repeats had sequence length in class I, accounting for 71.6% (3,216 SSRs) of total SSRs, …
repeats had sequence length in class I, accounting for 71.6% (3,216 SSRs) of total SSRs, …
Deciphering the regulatory network of miR156 in plant architecture and abiotic stress resistance of alfalfa (Medicago sativa) by transcriptome sequencing
H Zhang, S Jia, M Zhang, K Wang, F Teng, Y Liu… - Industrial Crops and …, 2022 - Elsevier
… with both 5′ and 3′ ends after removing the redundant sequences. A comparative analysis
of our unique full-length transcripts identified 12,596 … sativa cultivar "Zhongmu No.1". A …
of our unique full-length transcripts identified 12,596 … sativa cultivar "Zhongmu No.1". A …
Pan-transcriptome identifying master genes and regulation network in response to drought and salt stresses in Alfalfa (Medicago sativa L.)
… of transcripts reconstruction based on short read sequences … -Seq to generate the full-length
transcripts and RNA-seq to correct the transcript sequences allowed us to identify full length …
transcripts and RNA-seq to correct the transcript sequences allowed us to identify full length …
The Medicago sativa gene index 1.2: a web-accessible gene expression atlas for investigating expression differences between Medicago sativa subspecies
… Transcripts from roots, nitrogen-fixing root nodules, leaves, flowers, elongating stem … the
Medicago sativa Gene Index 1.2 (MSGI 1.2) representing 112,626 unique transcript sequences. …
Medicago sativa Gene Index 1.2 (MSGI 1.2) representing 112,626 unique transcript sequences. …
De Novo Characterization of Fall Dormant and Nondormant Alfalfa (Medicago sativa L.) Leaf Transcriptome and Identification of Candidate Genes Related to Fall …
S Zhang, Y Shi, N Cheng, H Du, W Fan, C Wang - PLoS One, 2015 - journals.plos.org
… Although the genome of alfalfa is unavailable at present, the genome size was predicted to
be 800 Mb[24]. Alfalfa leaf transcriptome sequencing in our study resulted in a relatively high …
be 800 Mb[24]. Alfalfa leaf transcriptome sequencing in our study resulted in a relatively high …