The metagenomics RAST server–a public resource for the automatic phylogenetic and functional analysis of metagenomes

F Meyer, D Paarmann, M D'Souza, R Olson… - BMC …, 2008 - Springer
… Regardless of the sequencing approach used to generate the … functional analysis of
metagenomes has been validated with 90 different samples from nine major biomes. The analysis

A genome-wide analysis of lentivector integration sites using targeted sequence capture and next generation sequencing technology

D Ustek, S Sirma, E Gumus, M Arikan, A Cakiris… - Infection, Genetics and …, 2012 - Elsevier
… Before a further analysis, we renamed all sequences that have been aligned to the LTRs …
about molecular function and biological process of RefSeq genes determined. Functional

Next-generation sequencing technologies: An overview

T Hu, N Chitnis, D Monos, A Dinh - Human Immunology, 2021 - Elsevier
… Tertiary NGS analysis involves variant annotation and interpretation. This analysis usually
involves functional annotation of discovered variants (eg, SNP, INDEL, and CNV interpretation…

Recent advancement in next-generation sequencing techniques and its computational analysis

K Raza, S Ahmad - International Journal of Bioinformatics …, 2019 - inderscienceonline.com
… been developed to cater high demand for cheaper as well as faster sequencing technology.
… of DNA regions which interact with regulatory proteins in functional regulation of gene …

New sequencing technologies

IG Gut - Clinical and Translational Oncology, 2013 - Springer
… Four generations of DNA sequencing technologies can be distinguished by their nature and
… Differences report on the function of the cancer cells. Whole genome sequencing is also …

Landscape of next-generation sequencing technologies

TP Niedringhaus, D Milanova, MB Kerby… - Analytical …, 2011 - ACS Publications
… third-generation sequencing platform based on a real-time, single-molecule sequencing
technology. … labeled nucleotides onto a complementary sequencing template. At the heart of this …

Comparison of next generation sequencing technologies for transcriptome characterization

PK Wall, J Leebens-Mack, AS Chanderbali, A Barakat… - BMC genomics, 2009 - Springer
… outcomes for different transcriptome sequencing technologies with a complex … function of
MB of sequence; right column gives predicted outcomes as a function of estimated sequencing

Exome Sequencing and Functional Analysis Identifies a Novel Mutation in EXT1 Gene That Causes Multiple Osteochondromas

F Zhang, J Liang, X Guo, Y Zhang, Y Wen, Q Li… - PLoS …, 2013 - journals.plos.org
… With the rapid development of DNA sequencing technology, whole exome sequencing is …
of exome sequencing for gene mapping of diseases [15], [16], [17], [18]. Exome sequencing

Short-read sequencing technologies for transcriptional analyses

SA Simon, J Zhai, RS Nandety… - Annual Review of …, 2009 - annualreviews.org
technology behind sequencing is changing the limits of our ability to identify genes and
understand gene expression in fundamental ways. DNA sequencing technologiessequencing

[HTML][HTML] Wheat functional genomics in the era of next generation sequencing: an update

M Jia, J Guan, Z Zhai, S Geng, X Zhang, L Mao, A Li - The Crop Journal, 2018 - Elsevier
… For functional analysis, each of the three homoeologs has to be individually evaluated and
functional genomics would never have been possible using earlier sequencing technologies. …