Fungal secretomes—nature's toolbox for white biotechnology

H Bouws, A Wattenberg, H Zorn - Applied microbiology and biotechnology, 2008 - Springer
… hand and the availability of annotated fungal genomes and sophisticated bioinformatic …
fungal secretomes has become feasible. While a number of reports on ascomycetous secretomes

Hunting down fungal secretomes using liquid‐phase IEF prior to high resolution 2‐DE

D Vincent, MH Balesdent, J Gibon, S Claverol… - …, 2009 - Wiley Online Library
… and symbiotic fungi with plants. Using the plant pathogenic fungus Leptosphaeria maculans
… for extraction, concentration and resolution of the fungal secretome. As no proteomic data …

From fungal secretomes to enzymes cocktails: The path forward to bioeconomy

C Filiatrault-Chastel, S Heiss-Blanquet, A Margeot… - Biotechnology …, 2021 - Elsevier
… of fungal secretomes using improved computational and experimental secretomics methods,
the progress in the understanding of industrially important fungi, … of fungal secretomes for …

Fungal secretome database: integrated platform for annotation of fungal secretomes

J Choi, J Park, D Kim, K Jung, S Kang, YH Lee - BMC genomics, 2010 - Springer
… To enhance prediction accuracy, we constructed Fungal Secretome Database (FSD). … fungi
and oomycetes, we used the pipeline to analyze all predicted proteins encoded by 158 fungal

Comparative analysis of secretomes in basidiomycete fungi

M Alfaro, JA Oguiza, L Ramírez, AG Pisabarro - Journal of Proteomics, 2014 - Elsevier
… More than 265 fungal genomes (more than 90 corresponding to … The study of fungal secretomes
from the scope of their … used for studying basidiomycetes' secretomes and compare the …

Fungal secretome profile categorization of CAZymes by function and family corresponds to fungal phylogeny and taxonomy: Example Aspergillus and Penicillium

K Barrett, K Jensen, AS Meyer, JC Frisvad, L Lange - Scientific reports, 2020 - nature.com
… By assigning the “Function;Family” connection and comparing the enzyme profile relatedness
from fungal secretomes, we capture the feature that fungal genomes often harbor capacity …

Comparative analysis of secretome profiles of manganese (II)-oxidizing ascomycete fungi

CA Zeiner, SO Purvine, EM Zink, L Paša-Tolić… - PloS one, 2016 - journals.plos.org
… This work highlights the rich functional diversity and oxidative capacity of these fungal
secretomes, demonstrates the utility of comparative proteomics in interrogating diverse species, …

Identification of new signalling peptides through a genome-wide survey of 250 fungal secretomes

M Le Marquer, H San Clemente, C Roux, B Savelli… - BMC genomics, 2019 - Springer
… , our study presents so far the most extended analysis of fungal secreted proteins. Before …
than filamentous fungi. We also observe that plant pathogens display a larger secretome than …

FunSecKB: the fungal secretome knowledgebase

G Lum, XJ Min - Database, 2011 - academic.oup.com
fungal secretomes for identification, annotation and curation of both computationally predicted
and experimentally identified fungal … well as collecting information on fungal secretomes. …

A fungal secretome adapted for stress enabled a radical wood decay mechanism

J Castaño, J Zhang, M Zhou, CF Tsai, JY Lee, C Nicora… - MBio, 2021 - Am Soc Microbiol
… this, we present high-resolution insight into how ROS affect the GH proteins of these fungi. …
found, using deeper assessments of the fungal secretome, that specific oxidation events likely …