… genes were induced at 0.03/h. The present study suggests that biofilm gene expression
is strongly associated with environmental conditions and that stress genes are involved in E…

Global transcription responses of Escherichia coli to various stimuli or genetic defects were
studied by measuring mRNA levels in about 400 segments of the genome. Measuring mRNA …

… activity of an unusually large number of operons in E. coli. We discuss the possible physiological
relevance of the involvement of IHF in gene expression and the hypothesis that IHF is a …

… Because we have linked the sensors to gene expression outputs in E. coli, standard laboratory
evolution methods targeting critical amino acids in the chromophore binding domain or …

… By placing these constructs in identical regulatory contexts and measuring their expression,
we isolated the effects of synonymous variation on gene expression. The GFP gene consists …

… to coordinate its global patterns of geneexpression to its growth and environmental conditions.
We propose that globallevels of gene expression from specific promoters are coupled to …

… Taken together, the data indicate that gene expression within our established E. coli biofilm
is different … The higher number of genes observed to be affected in the present study of E. …

… was differentially expressed (22 genes upregulated and 201 genes repressed) (Ren et al.,
2004a). From this initial microarray study, by exploring differential gene expression of …

… In the facultative anaerobe Escherichia coli two transcriptional regulators controlling
independent networks of oxygen-regulated gene expression have been identified. One is a two-…

… in highly expressed E. coli proteins. Finally we confirmed the validity of our models by
designing, synthesizing and testing new genes using codon biases predicted to perform well. …