Pathways for horizontal gene transfer in bacteria revealed by a global map of their plasmids
S Redondo-Salvo, R Fernández-López, R Ruiz… - Nature …, 2020 - nature.com
Plasmids can mediate horizontal gene transfer of antibiotic resistance, virulence genes, and
other adaptive factors across bacterial populations. Here, we analyze genomic composition …
other adaptive factors across bacterial populations. Here, we analyze genomic composition …
Pathways for horizontal gene transfer in bacteria revealed by a global map of their plasmids
S Redondo, R Fernández López, R Ruiz, L Vielva… - 2020 - digital.csic.es
Plasmids can mediate horizontal gene transfer of antibiotic resistance, virulence genes, and
other adaptive factors across bacterial populations. Here, we analyze genomic composition …
other adaptive factors across bacterial populations. Here, we analyze genomic composition …
Ecology drives a global network of gene exchange connecting the human microbiome
… Quartet mapping and a gene loss analysis each support 99% of identified HGTs (…
relative to other environments, we compare gene transfer between the 1,183 human-associated …
relative to other environments, we compare gene transfer between the 1,183 human-associated …
Batch-learning self-organizing map identifies horizontal gene transfer candidates and their origins in entire genomes
T Abe, Y Akazawa, A Toyoda, H Niki… - Frontiers in microbiology, 2020 - frontiersin.org
… gene transfer (HGT) has been widely suggested to play a critical role in the environmental
adaptation of microbes; however, the number and origin of the genes … Self-Organizing Map (…
adaptation of microbes; however, the number and origin of the genes … Self-Organizing Map (…
Horizontal gene transfer: a critical view
CG Kurland, B Canback… - Proceedings of the …, 2003 - National Acad Sciences
… gene transfers such as those encoding antibiotic-resistance phenotypes or pathogenesis
islands are often found in patches, ie, in small subpopulations of a global … Here we reveal maps …
islands are often found in patches, ie, in small subpopulations of a global … Here we reveal maps …
Inference and characterization of horizontally transferred gene families using stochastic mapping
… mapping to infer branch-specific events. Our novel methodology allows us to infer and
quantify horizontal gene transfer … to the gene family at hand, for example, the global-mapping …
quantify horizontal gene transfer … to the gene family at hand, for example, the global-mapping …
Dissemination of antimicrobial resistance in microbial ecosystems through horizontal gene transfer
CJH Von Wintersdorff, J Penders… - Frontiers in …, 2016 - frontiersin.org
… resistance genes (… genetic elements and bacteriophages—form a reservoir of ARGs (the
resistome) from which pathogenic bacteria can acquire resistance via horizontal gene transfer (…
resistome) from which pathogenic bacteria can acquire resistance via horizontal gene transfer (…
Adaptive evolution of bacterial metabolic networks by horizontal gene transfer
… gene transfer, with little contribution from gene duplicates. Networks grow by acquiring genes
… Accordingly, horizontally transferred genes are integrated at the periphery of the network, …
… Accordingly, horizontally transferred genes are integrated at the periphery of the network, …
Genes and hypertension: from gene mapping in experimental models to vascular gene transfer strategies
AF Dominiczak, DC Negrin, JS Clark, MJ Brosnan… - …, 2000 - Am Heart Assoc
… gene transfer of adenovirus encoding eNOS gene to vascular rings of mice with targeted
disruption (knockout) of this gene … be significantly improved by gene transfer in vessels in which …
disruption (knockout) of this gene … be significantly improved by gene transfer in vessels in which …
Horizontal gene transfer and the evolution of bacterial and archaeal population structure
… The madness we refer to is rapid gene turnover due to horizontal gene transfer (HGT) and
gene loss, which can lead to extensive genome differences among closely related bacteria …
gene loss, which can lead to extensive genome differences among closely related bacteria …
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