Cancer transcriptome profiling at the juncture of clinical translation

M Cieślik, AM Chinnaiyan - Nature Reviews Genetics, 2018 - nature.com
… and translational impact of transcriptome profiling in cancer. … Genetic events that can be
directly or indirectly detected by transcriptome profiling include SNVs107–112, gene fusions and …

Transcriptomic profiling and genetic analyses reveal novel key regulators of cellulase and xylanase gene expression in Penicillium oxalicum

YS Yan, S Zhao, LS Liao, QP He, YR Xiong… - Biotechnology for …, 2017 - Springer
… Regulatory genes have been the targets of genetic … , we used transcriptomic profiling and
genetic analyses to screen for and identify novel key regulators of cellulase and xylanase gene

Integrated analysis of whole-exome sequencing and transcriptome profiling in males with autism spectrum disorders

M Codina-Solà, B Rodríguez-Santiago, A Homs… - Molecular autism, 2015 - Springer
… An additional approach to identify genetic variants associated with a phenotype and to …
genetic variation could be derived from observing the transcriptomic consequences of genetic

Transcriptome profiling and network analysis of genetically hypertensive mice identifies potential pharmacological targets of hypertension

O Puig, IM Wang, P Cheng, P Zhou… - Physiological …, 2010 - journals.physiology.org
… To better understand how differences in gene expression lead to … the analysis of Fries
and collaborators by profiling several … the gene expression signatures into kidney Genetic

Integrating transcriptome and proteome profiling: Strategies and applications

D Kumar, G Bansal, A Narang, T Basak, T Abbas… - …, 2016 - Wiley Online Library
Gene expression profiles, either in the form of transcriptome and/or proteome, provide …
Rather, by integrating high-throughput transcriptome profiling, such as captured by RNA-seq, may …

Unsupervised analysis of transcriptomic profiles reveals six glioma subtypes

A Li, J Walling, S Ahn, Y Kotliarov, Q Su, M Quezado… - Cancer research, 2009 - AACR
… the genes to be analyzed from a manually curated list of genes thought to be relevant but
rather to include all informative genes to represent the entire transcriptomic profiles of … analyses

Transcriptome profiling using next-generation sequencing

YW Asmann, MB Wallace, EA Thompson - Gastroenterology, 2008 - gastrojournal.org
analysis of transcriptome profiles has become a standard tool in clinical research. 1 The
prevailing wisdom holds that one should be able to interpret patterns of gene … to analysis of gene

Transcriptomic profiling of 39 commonly-used neuroblastoma cell lines

JL Harenza, MA Diamond, RN Adams, MM Song… - Scientific Data, 2017 - nature.com
… Here, we present raw whole transcriptome data generated by RNA sequencing of 39 … These
data can be used to perform differential expression analysis based on a genetic aberration …

Transcriptomic profiles in Parkinson's disease

L Kurvits, F Lättekivi, E Reimann… - Experimental …, 2021 - journals.sagepub.com
… skin transcription analysis, two differentially expressed genes … first time a meta-analysis is
applied on transcriptomic sample sets in … genes and pathways, suggesting that divergent gene

Transcriptome profiling and network pathway analysis of genes associated with invasive phenotype in oral cancer

CJ Kang, YJ Chen, CT Liao, HM Wang, JT Chang… - Cancer letters, 2009 - Elsevier
Transcriptome profiling and network analysis of genes associated with invasive phenotype
in oral carcinoma cells. Microarray analysis of OECM1 cells and invasive cell sublines. (A) …