Molecular evolutionary characteristics of SARSCoV‐2 emerging in the United States

S Wang, X Xu, C Wei, S Li, J Zhao… - Journal of medical …, 2022 - Wiley Online Library
SARS-CoV-2 is a newly discovered beta coronavirus at the … SARS-CoV-2 whole genome
sequences and the sequence … of the genomes, we only show 380 genome sequences in Figure …

A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology

A Rambaut, EC Holmes, Á O'Toole, V Hill… - Nature …, 2020 - nature.com
… The viral genome sequences used in this paper are publicly available from GISAID (http://…
for the GISAID genome sequences used to develop this work is available at https://cov-lineages…

Revealing COVID-19 transmission in Australia by SARS-CoV-2 genome sequencing and agent-based modeling

RJ Rockett, A Arnott, C Lam, R Sadsad, V Timms… - Nature medicine, 2020 - nature.com
… of near real-time genome sequencing of SARS-CoV-2 in a … and compare findings from
genomic surveillance with predictions … We report that the prospective sequencing of SARS-CoV-2 …

Molecular evolution of the SARS coronavirus during the course of the SARS epidemic in China

Chinese SARS Molecular Epidemiology Consortium - Science, 2004 - science.org
Genomic sequence data for SARS-CoV were largely derived from isolates linked to the …
We determined 29 SARS-CoV genomic sequences obtained from 22 patients from Guangdong …

The importance and challenges of identifying SARS-CoV-2 reinfections

A Babiker, CE Marvil, JJ Waggoner… - Journal of clinical …, 2021 - Am Soc Microbiol
genome sequencing is … genome sequencing to distinguish reinfection from within-patient
virus evolution. Compared to many RNA viruses, SARS-CoV-2 has a relatively stable genome

Infection of dogs with SARS-CoV-2

THC Sit, CJ Brackman, SM Ip, KWS Tam, PYT Law… - Nature, 2020 - nature.com
… Kong for the Illumina MiSeq sequencing of viral genomes; and the originating … sequences
and other associated data through the GISAID Initiative for SARS-CoV-2 genome sequences. …

Genomic epidemiology of SARS-CoV-2 in Guangdong province, China

J Lu, L du Plessis, Z Liu, V Hill, M Kang, H Lin, J Sun… - Cell, 2020 - cell.com
… (B) Time series of the 53 SARS-CoV-2 genomes we report, by collection date. Genomes
are … coverage for which we report whole and partial genome sequences (see Figure S2 for …

Whole genome sequencing of SARS-CoV-2: adapting Illumina protocols for quick and accurate outbreak investigation during a pandemic

S Pillay, J Giandhari, H Tegally, E Wilkinson… - Genes, 2020 - mdpi.com
… by gene-specific multiplex PCR, using the ARTIC protocol, as described previously [13]. In
summary, SARS-CoV-2 whole-genome … the 30 kilobase SARS-CoV-2 genome. PCR products …

[HTML][HTML] Characteristics of SARS-CoV-2 and COVID-19

B Hu, H Guo, P Zhou, ZL Shi - Nature reviews microbiology, 2021 - nature.com
… The first genome sequence of the novel coronavirus was published on the Virological
website on 10 January, and more nearly complete genome sequences determined by different …

Sequence analysis of SARS-CoV-2 genome reveals features important for vaccine design

J Kames, DD Holcomb, O Kimchi, M DiCuccio… - Scientific reports, 2020 - nature.com
… As the SARS-CoV-2 pandemic is rapidly progressing, the … in question, other than its genome
sequence. Therefore, it is well … of several features of SARS-CoV-2 genomic sequence (eg, …