[HTML][HTML] Clinical use of whole genome sequencing for Mycobacterium tuberculosis

AA Witney, CA Cosgrove, A Arnold, J Hinds, NG Stoker… - BMC medicine, 2016 - Springer
genome sequencing (WGS) to transform tuberculosis (TB) diagnostics, when the then recent
use of “next generation” sequencing … (XDR) isolates of Mycobacterium tuberculosis was …

[HTML][HTML] Mycobacterium tuberculosis and whole-genome sequencing: how close are we to unleashing its full potential?

G Satta, M Lipman, GP Smith, C Arnold, OM Kon… - Clinical Microbiology …, 2018 - Elsevier
… completion of the genome sequence of Mycobacterium tuberculosis (MTB), and with the
advent of next generation sequencing technologies (NGS), whole-genome sequencing (WGS) …

Whole genome sequencing of Mycobacterium tuberculosis: current standards and open issues

…, RM Warren, Y Zhao, M Zignol, M Schito… - NATURE reviews …, 2019 - nature.com
… Whole genome sequencing (WGS) of Mycobacterium tuberculosis has rapidly progressed
from a research tool to a clinical application for the diagnosis and management of tuberculosis

[HTML][HTML] Whole-genome sequencing to delineate Mycobacterium tuberculosis outbreaks: a retrospective observational study

TM Walker, CLC Ip, RH Harrell, JT Evans… - The Lancet infectious …, 2013 - thelancet.com
… In a retrospective observational study, we used Illumina technology to sequence M tuberculosis
genomes from an archive of frozen cultures. We characterised isolates into four groups: …

Clinical value of whole-genome sequencing of Mycobacterium tuberculosis

HE Takiff, O Feo - The Lancet Infectious Diseases, 2015 - thelancet.com
… -genome sequencing (… sequence a complete bacterial genome for US$500 or less. Many
studies have addressed questions about tuberculosis with WGS, and knowing the sequence of …

Whole genome sequencing of Mycobacterium tuberculosis

AM Cabibbe, TM Walker, S Niemann… - European Respiratory …, 2018 - Eur Respiratory Soc
… Moreover, technological constraints mean that only a few genomic loci can be
simultaneously investigated [4]. Sanger DNA sequencing, developed in the 1970s, enabled …

Mycobacterium tuberculosis Next‐Generation Whole Genome Sequencing: Opportunities and Challenges

T Iketleng, R Lessells, MT Dlamini… - Tuberculosis …, 2018 - Wiley Online Library
… We highlight how analysis of M. tuberculosis whole genome sequence data could routinely
provide guidance for individual … We also look at challenges or barriers to application of M. …

Rapid whole-genome sequencing of Mycobacterium tuberculosis isolates directly from clinical samples

…, H Tutill, J Brown, M Melzer… - Journal of clinical …, 2015 - Am Soc Microbiol
… of highly resistant Mycobacterium tuberculosis. Whole-genome sequencing provides …
conventional molecular tests, this has previously been achievable only from cultures of M. …

Mycobacterium tuberculosis–heterogeneity revealed through whole genome sequencing

…, K Yusim, T Ioerger, S Feng, M Chase, M Greene… - Tuberculosis, 2012 - Elsevier
… With the rapid development of whole genome sequencing (WGS) technologies, we have
unprecedented capacity to detect genetic diversity in Mycobacterium tuberculosis (Mtb). WGS is …

[HTML][HTML] Whole-genome sequencing for prediction of Mycobacterium tuberculosis drug susceptibility and resistance: a retrospective cohort study

TM Walker, TA Kohl, SV Omar, J Hedge… - The Lancet infectious …, 2015 - thelancet.com
… -genome sequencing to characterise common and rare mutations predicting drug resistance,
or consistency with susceptibility, for all first-line and second-line drugs for tuberculosis. …