[HTML][HTML] The Chloroplast Genome of Carya illinoinensis: Genome Structure, Adaptive Evolution, and Phylogenetic Analysis

Z Mo, W Lou, Y Chen, X Jia, M Zhai, Z Guo, J Xuan - Forests, 2020 - mdpi.com
… chloroplast (cp) genome of Carya illinoinensis cv. ‘Pawnee’ was de novo assembled.
Comprehensive analysis the cp genome of C. illinoinensis revealed potential cpDNA markers for …

Chloroplast genome sequences of Carya illinoinensis from two distinct geographic populations

X Wang, HS Rhein, J Jenkins, J Schmutz… - … Genetics & Genomes, 2020 - Springer
… between genomes were calculated in DnaSp V6.11.01 (Rozas et al. 2017). The … Carya
illinoinensis whole chloroplast genome sequences were aligned with whole chloroplast genome

[HTML][HTML] Chloroplast genome sequencing of Carya Illinoinensis cv. Xinxuan-4, a new pecan pollinated cultivar

Y Chen, S Zhang, W Wang, X Chen, Y Zhao, Z Mo… - Fruit …, 2024 - maxapress.com
… Our main objectives in this study were to: (1) ascertain the cp genome's structure and
composition; (2) carry out an analysis of codon preference; (3) detect repeats and microsatellite …

[HTML][HTML] Characterization and Development of Genomic SSRs in Pecan (Carya illinoinensis)

C Zhang, X Yao, H Ren, J Chang, J Wu, W Shao… - Forests, 2020 - mdpi.com
… This study significantly promoted the genetic study in genus Carya. However, considering
the large information content, high convenience, and low cost of SSR, SNP is unlikely to …

[HTML][HTML] The Complete Chloroplast Genome of Carya cathayensis and Phylogenetic Analysis

J Shen, X Li, X Chen, X Huang, S Jin - Genes, 2022 - mdpi.com
… cathayensis is sister to Carya kweichowensis and Carya illinoinensis. The genome comparison
… The newly characterized cp genome of C. cathayensis provides valuable information for …

The complete chloroplast genome sequence of Carya illinoinensis cv. wichita and its phylogenetic analysis

G Feng, ZH Mo, FR Peng - Mitochondrial DNA Part B, 2020 - Taylor & Francis
… A total of 128 genes were predicted to contain in the whole cp genome, including 83 protein-…
of the cp genome is 36.19%. Phylogenomic analysis suggested Carya illinoinensis as a …

Genome-wide identification of KCS gene family in Carya illinoinensis and their roles under abiotic stress conditions

H Wang, T He, C Huang, K Wang, D Shi, X Si, Y Xu… - Scientia …, 2023 - Elsevier
… thaliana, the gray lines in the background denoted the collinear blocks within Carya illinoinensis
and other two species genomes. (D)The Ka and Ks distribution of 22 paralogous pairs (…

Genome-wide identification of B3 superfamily in pecan (Carya illinoensis): In silico and experimental analyses

L Wang, F Chen, Y Lan, H Liu, M Wu, H Yan… - Scientia …, 2023 - Elsevier
… to identify B3 gene family members in Carya illinoensis. First, we obtained the gene ID of …
We observed a phenomenon in the gene structure of the RAV family of pecans. More than half …

Molecular markers in Carya illinoinensis (Juglandaceae): from genetic characterization to molecular breeding

L Oliveira de Oliveira, D Carlos Beise… - The Journal of …, 2021 - Taylor & Francis
… Measurement of genetic diversity of native pecan [Carya illinoensis (Wangenh) K. Koch]
populations established in Central Mexico and correlation with dichogamous flowering using …

Genome-wide identification of the Carya illinoinensis bZIP transcription factor and the potential function of S1-bZIPs in abiotic stresses

N Jiang, L Wang, Y Lan, H Liu, X Zhang, W He… - … Genetics & Genomes, 2023 - Springer
… Therefore, this study explored the classification of the pecan bZIP gene family, gene structure,
Ka/Ks, promoter cis-acting elements, and the expression levels and interaction network of …