Detection of SARS-CoV-2 from patient fecal samples by whole genome sequencing
A Papoutsis, T Borody, S Dolai, J Daniels, S Steinberg… - Gut pathogens, 2021 - Springer
… to execute whole genome analysis to characterize SARS-CoV-2 mutational … genome
sequencing (WGS) of SARS-CoV-2 from stool samples. Herein we were able to identify SARS-CoV-…
sequencing (WGS) of SARS-CoV-2 from stool samples. Herein we were able to identify SARS-CoV-…
Classification of SARS-CoV-2 viral genome sequences using Neurochaos Learning
… \) for the classification of SARS-CoV-2 from SARS-CoV-1 genome sequences. We compare
the … We foresee promising future applications in genome classification using NL with novel …
the … We foresee promising future applications in genome classification using NL with novel …
[HTML][HTML] Insights into SARS-CoV-2 genome, structure, evolution, pathogenesis and therapies: Structural genomics approach
… Our analysis suggests a minimal variation in the genome sequence of SARS-CoV-2, may
be responsible for a drastic change in the structures of target proteins, which makes available …
be responsible for a drastic change in the structures of target proteins, which makes available …
[HTML][HTML] Virus isolation from the first patient with SARS-CoV-2 in Korea
WB Park, NJ Kwon, SJ Choi, CK Kang… - Journal of Korean …, 2020 - ncbi.nlm.nih.gov
… genome sequences showed that it clustered with other SARS-CoV-2 reported from Wuhan.
… isolation of SARS-CoV-2 using Vero cells from a patient entering Korea from Wuhan, China. …
… isolation of SARS-CoV-2 using Vero cells from a patient entering Korea from Wuhan, China. …
Transmission of SARS-CoV-2 among healthcare workers and patients in a teaching hospital in the Netherlands confirmed by whole-genome sequencing
S Paltansing, RS Sikkema, SJ De Man… - Journal of Hospital …, 2021 - Elsevier
… (4%) patients tested positive for SARS-CoV-2. Samples from 59 cases were referred for
sequencing, yielding 50 whole-genome sequences from 30 HCWs and 20 patients (Table I). …
sequencing, yielding 50 whole-genome sequences from 30 HCWs and 20 patients (Table I). …
A novel and expanding SARS-CoV-2 variant, B. 1.526, identified in New York
… Within our genomic … of SARS-CoV-2 variants identified by sequencing and alignment of
key spike mutations. Unique patterns of spike protein mutations present in genomes sequenced …
key spike mutations. Unique patterns of spike protein mutations present in genomes sequenced …
High‐coverage SARS‐CoV‐2 genome sequences acquired by target capture sequencing
S Wen, C Sun, H Zheng, L Wang… - Journal of medical …, 2020 - Wiley Online Library
… SARS-CoV-2 genomes (mean depth being 186 869× and minimum coverage 13 816×). Only
the merged sequence (… , we also reconstructed three SARS-CoV-2 genomes (mean depth …
the merged sequence (… , we also reconstructed three SARS-CoV-2 genomes (mean depth …
Genomic perspectives on the emerging SARS-CoV-2 omicron variant
… This study analyzed the viral genome sequencing data of 108 samples collected from patients
infected with Omicron. First, we found that the enrichment efficiency of viral nucleic acids …
infected with Omicron. First, we found that the enrichment efficiency of viral nucleic acids …
An updated analysis of variations in SARS-CoV-2 genome
… were evaluated for validation according to genomic positions … In this study, 30366 SARS-CoV-2
isolate genome sequences … of 30366 SARS-CoV-2 isolate genome sequences produced …
isolate genome sequences … of 30366 SARS-CoV-2 isolate genome sequences produced …
Genomic epidemiology of the first wave of SARS-CoV-2 in Italy
F Di Giallonardo, S Duchene, I Puglia, V Curini… - Viruses, 2020 - mdpi.com
… the genomic epidemiology of SARS-CoV-2 in Italy covering the first wave of infection. We
generated 191 new full-length genomes, … regions, we combined genome sequences into larger …
generated 191 new full-length genomes, … regions, we combined genome sequences into larger …