[HTML][HTML] A genomic perspective on the origin and emergence of SARS-CoV-2
YZ Zhang, EC Holmes - Cell, 2020 - cell.com
… The ongoing pandemic of a new human coronavirus, SARS-CoV-2, … genome sequencing
of the virus. Herein, we describe what genomic data reveal about the emergence SARS-CoV-2 …
of the virus. Herein, we describe what genomic data reveal about the emergence SARS-CoV-2 …
Comparative full-length genome sequence analysis of 14 SARS coronavirus isolates and common mutations associated with putative origins of infection
… We aimed to determine the complete genome sequence for five SARS-CoV related isolates
… genome sequences of Singapore SARS-CoV isolates and the nine SARS-CoV genomes …
… genome sequences of Singapore SARS-CoV isolates and the nine SARS-CoV genomes …
[HTML][HTML] CoronaHiT: high-throughput sequencing of SARS-CoV-2 genomes
… and throughput flexible method for sequencing SARS-CoV-2 genomes (≤ 96 on MinION or
… was demonstrated by sequencing 2 plates containing 95 and 59 SARS-CoV-2 genomes on …
… was demonstrated by sequencing 2 plates containing 95 and 59 SARS-CoV-2 genomes on …
[HTML][HTML] An epidemiological analysis of SARS-CoV-2 genomic sequences from different regions of India
… The analysis of the genome sequences of the SARS-CoV-2 retrieved in this study led to
the identification of individual amino acid mutations present in the early samples. Recently, a …
the identification of individual amino acid mutations present in the early samples. Recently, a …
[HTML][HTML] A comparison of whole genome sequencing of SARS-CoV-2 using amplicon-based sequencing, random hexamers, and bait capture
JA Nasir, RA Kozak, P Aftanas, AR Raphenya… - Viruses, 2020 - mdpi.com
… The primary objective of this analysis is to compare genome sequencing results from direct
amplification of the SARS-CoV-2 genome (ie, the Liverpool or ARTIC PCR protocols) [7] with …
amplification of the SARS-CoV-2 genome (ie, the Liverpool or ARTIC PCR protocols) [7] with …
[HTML][HTML] The next phase of SARS-CoV-2 surveillance: real-time molecular epidemiology
… coronavirus disease 2019 (COVID-19) pandemic is the first to apply whole-genome
sequencing … syndrome coronavirus 2 (SARS-CoV-2) whole-genome sequences generated and …
sequencing … syndrome coronavirus 2 (SARS-CoV-2) whole-genome sequences generated and …
[PDF][PDF] CoV-GLUE: a web application for tracking SARS-CoV-2 genomic variation
J Singer, R Gifford, M Cotten, D Robertson - 2020 - researchgate.net
… Summary CoV-GLUE is an online web application for the interpretation and analysis of
SARSCoV-2 virus genome sequences, with a focus on amino acid sequence variation. It is based …
SARSCoV-2 virus genome sequences, with a focus on amino acid sequence variation. It is based …
[HTML][HTML] Revealing COVID-19 transmission in Australia by SARS-CoV-2 genome sequencing and agent-based modeling
… of near real-time genome sequencing of SARS-CoV-2 in a … and compare findings from
genomic surveillance with predictions … We report that the prospective sequencing of SARS-CoV-2 …
genomic surveillance with predictions … We report that the prospective sequencing of SARS-CoV-2 …
[HTML][HTML] Analytical validity of nanopore sequencing for rapid SARS-CoV-2 genome analysis
… To further evaluate the suitability of ONT sequencing for SARS-CoV-2 genomics, we conducted
rigorous proficiency testing using bona fide clinical specimens. We performed ONT and …
rigorous proficiency testing using bona fide clinical specimens. We performed ONT and …
Assessment of SARS-CoV-2 genome sequencing: quality criteria and low-frequency variants
D Jacot, T Pillonel, G Greub… - Journal of Clinical …, 2021 - Am Soc Microbiol
… Hence, we aimed here to provide simple quality control criteria for SARS-CoV-2 sequencing
… investigated 647 SARS-CoV-2 genomes obtained over 10 tiled amplicons sequencing runs. …
… investigated 647 SARS-CoV-2 genomes obtained over 10 tiled amplicons sequencing runs. …