The evolving SARS-CoV-2 epidemic in Africa: Insights from rapidly expanding genomic surveillance

H Tegally, JE San, M Cotten, M Moir, B Tegomoh… - Science, 2022 - science.org
coronavirus 2 (SARS-CoV-2) sequencing in Africa over the past year has led to a major
increase in the number of sequences … that now exceeds 100,000 genomes. Our results show an …

[HTML][HTML] Genome sequencing of SARS-CoV-2 allows monitoring of variants of concern through wastewater

M Herold, AF d'Hérouël, P May, F Delogu… - Water, 2021 - mdpi.com
SARS-CoV-2 lineages circulating in the Luxembourg population from genomic sequencing
of … present in patient-derived consensus sequences to corresponding mutations detected in …

[HTML][HTML] Genome evolution of SARS-CoV-2 and its virological characteristics

S Nakagawa, T Miyazawa - Inflammation and regeneration, 2020 - Springer
… of SARS-CoV-2 and compare them with other coronaviruses. More than 30,000 genome
sequences of SARS-CoV-2 are … Using the genome sequence data of closely related viruses, the …

[HTML][HTML] Global variation in sequencing impedes SARS-CoV-2 surveillance

DC Crawford, SM Williams - PLoS genetics, 2021 - journals.plos.org
… in genomic sequencing rooted in the Human Genome Project … in human genetics and genomic
research and technologies … of sequencing in several countries, the adoption of genomics

A SARS-CoV-2 cluster in an acute care hospital

M Klompas, MA Baker, C Rhee, R Tucker… - Annals of Internal …, 2021 - acpjournals.org
… via whole-genome sequencing that occurred despite staff … We were able to obtain
whole-genome sequences on most … the value of whole-genome sequencing to help define and …

[HTML][HTML] Genome sequencing of the first SARS-CoV-2 reported from patients with COVID-19 in Ecuador

S Márquez, B Prado-Vivar, JJ Guadalupe, B Gutierrez… - MedRxiv, 2020 - ncbi.nlm.nih.gov
… to invest in SARS-CoV-2 genome sequencing as it could help … Around 35,473 genome
sequences of SARS-CoV-2 have … first four SARS-CoV-2 whole genome sequences obtained from …

Phylogenetic network analysis of SARS-CoV-2 genomes

P Forster, L Forster, C Renfrew… - Proceedings of the …, 2020 - National Acad Sciences
… The nucleotide sequences of the SARS-CoV-2 genomes used in this analysis are
available, upon free registration, from the GISAID database (https://www.gisaid.org/). The …

Direct RNA sequencing and early evolution of SARS-CoV-2

G Taiaroa, D Rawlinson, L Featherstone, M Pitt, L Caly… - BioRxiv, 2020 - biorxiv.org
… Here we describe the first native RNA sequence of SARS-CoV-2, … sharing of sequence
information throughout the SARS-CoV-… The genome sequence of SARS-CoV-2 was rapidly …

SARS-CoV-2 variants of concern in the United States—challenges and opportunities

RP Walensky, HT Walke, AS Fauci - Jama, 2021 - jamanetwork.com
… first genomic sequence of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-…
As of February 3, 2021, 468 000 sequences of SARS-CoV-2 from COVID-19 cases globally …

[HTML][HTML] Genomic sequencing of SARS-CoV-2 in Rwanda reveals the importance of incoming travelers on lineage diversity

Y Butera, E Mukantwari, M Artesi, J Umuringa… - Nature …, 2021 - nature.com
… of SARS-CoV-2. Here we describe 203 SARS-CoV-2 whole genome sequences analyzed
… no genomic sequences were available. Our results highlight the importance of systematic …