Genome‐wide association study discovered genetic variation and candidate genes of fibre quality traits in Gossypium hirsutum L.

Z Sun, X Wang, Z Liu, Q Gu, Y Zhang… - Plant biotechnology …, 2017 - Wiley Online Library
… of these candidate genes among each … candidate genes using transcriptome sequencing
data. We investigated the expression level (log 2 (1+RPKM) > 1) of all 212 and 161 genes

Identification of SNPs and Candidate Genes Associated With Salt Tolerance at the Seedling Stage in Cotton (Gossypium hirsutum L.)

Z Sun, H Li, Y Zhang, Z Li, H Ke, L Wu… - Frontiers in Plant …, 2018 - frontiersin.org
hirsutum accessions. The objectives of this study were to identify the associated SNPs and
candidate genes, to contribute to understanding the mechanisms for salt tolerance and to …

Genomic analyses reveal the genetic basis of early maturity and identification of loci and candidate genes in upland cotton (Gossypium hirsutum L.)

L Li, C Zhang, J Huang, Q Liu, H Wei… - Plant Biotechnology …, 2021 - Wiley Online Library
… Several previously undescribed candidate genes associated with early maturity were
identified by GWAS. This study provides insights into the genetic basis of early maturity in upland …

Genome-wide association analysis reveals genetic variations and candidate genes associated with salt tolerance related traits in Gossypium hirsutum

P Xu, Q Guo, S Meng, X Zhang, Z Xu, W Guo, X Shen - BMC genomics, 2021 - Springer
… of candidate genes In general, the LD decay could be used as confidence interval to identify
candidate genes. … [28, 29], we extracted potential candidate genes within 100 kb of flanking …

… analysis and candidate gene identification for plant height in cotton based on an interspecific backcross inbred line population of Gossypium hirsutum× Gossypium …

J Ma, W Pei, Q Ma, Y Geng, G Liu, J Liu, Y Cui… - … and Applied Genetics, 2019 - Springer
… transcriptome data for the genes within the stable QTL regions, GhPIN3 encoding for the
hormone auxin efflux carrier protein was identified as a candidate gene located in the stable …

Genome-Wide Association Study Identifies Candidate Genes Related to Seed Oil Composition and Protein Content in Gossypium hirsutum L.

Y Yuan, X Wang, L Wang, H Xing, Q Wang… - Frontiers in Plant …, 2018 - frontiersin.org
… less spurious candidate genes in GWAS … more candidate genes possibly related to the
traits, which would be identified with the TM-1 gene expression database and candidate gene

… genes in a drought-tolerant cotton (Gossypium hirsutum L.) cultivar under reduced irrigation field conditions and development of candidate gene markers for drought …

L Rodriguez-Uribe, A Abdelraheem, R Tiwari… - Molecular …, 2014 - Springer
… DNA markers from these genes and associating them with drought tolerance. This work
represents the first study in identifying polymorphic candidate gene markers that were …

Identifying Functional Genes Influencing Gossypium hirsutum Fiber Quality

C Dong, J Wang, Y Yu, L Ju, X Zhou, X Ma… - Frontiers in plant …, 2019 - frontiersin.org
genes associated with phenotypic traits. In this study, we identified fiber quality genes in
upland cotton (Gossypium hirsutum L.) … In our study, 22 candidate genes in GR1 and GR2 on …

… association analysis reveals quantitative trait loci and candidate genes involved in yield components under multiple field environments in cotton (Gossypium hirsutum …

G Zhu, S Hou, X Song, X Wang, W Wang, Q Chen… - BMC Plant …, 2021 - Springer
Gene Ontology (GO) analysis for each trait was individually conducted to investigate the
candidate genes' function (Fig. 3, Additional file 11 Table S8). We found that candidate genes

Identification of Loci and Candidate Genes Responsible for Fiber Length in Upland Cotton (Gossypium hirsutum L.) via Association Mapping and Linkage Analyses

C Zhang, L Li, Q Liu, L Gu, J Huang, H Wei… - Frontiers in plant …, 2019 - frontiersin.org
… Furthermore, we found that a sucrose synthesis-related gene (… Favorable QTLs and candidate
genes should be useful for … Recently, a candidate gene responsible for plant height has …