[HTML][HTML] A high-quality genome assembly highlights rye genomic characteristics and agronomically important genes

G Li, L Wang, J Yang, H He, H Jin, X Li, T Ren, Z Ren… - Nature …, 2021 - nature.com
… 90.31% of the assembled genome. Compared to previously sequenced Triticeae genomes,
Daniela, … Further analyses of the Weining assembly shed new light on genome-wide gene …

[HTML][HTML] A chromosome-level genome assembly of an early matured aromatic Japonica rice variety Qigeng10 to accelerate rice breeding for high grain quality in …

S Jiang, X Zhang, X Yang, C Liu, L Wang… - Frontiers in Plant …, 2023 - frontiersin.org
genome assembly of an early-matured aromatic long-grain japonica rice variety Qigeng10
by using a combination of Nanopore and Hi-C platforms. The total assembly … -grain alleles (…

High-quality genome assembly of Huazhan and Tianfeng, the parents of an elite rice hybrid Tian-you-hua-zhan

H Zhang, Y Wang, C Deng, S Zhao, P Zhang… - Science China Life …, 2022 - Springer
… potential, wide adaptability and good grain qualitygenome assembly quality, we recommend
30-fold sequencing data for both PacBio and Nanopore data if there is no special genome

[HTML][HTML] Genome-wide association studies of grain quality traits in maize

Y Zheng, F Yuan, Y Huang, Y Zhao, X Jia, L Zhu… - Scientific reports, 2021 - nature.com
grain quality traits would help to breed high-quality varieties in maize. In this study, genome-…
(SNPs), and five grain quality traits were investigated in diverse environments for two years. …

[HTML][HTML] Classification of Grain Amaranths Using Chromosome-Level Genome Assembly of Ramdana, A. hypochondriacus

S Deb, S Jayaprasad, S Ravi, KR Rao… - Frontiers in Plant …, 2020 - frontiersin.org
genomics-based crop improvement, a high-quality genomeGrain amaranths produce
highly nutritional grains with a … For improving the agronomic traits of grain amaranth and for …

[HTML][HTML] A Genome-Wide Association Study Pinpoints Quantitative Trait Genes for Plant Height, Heading Date, Grain Quality, and Yield in Rye (Secale cereale L.)

D Siekmann, G Jansen, A Zaar, A Kilian… - Frontiers in Plant …, 2021 - frontiersin.org
… The genetic diversity in the protein-coding sequences of the ‘Lo7’ genome assembly
described in the present study provides candidate genes to further dissect the associated trait …

[HTML][HTML] Genomics of grain quality in cereals

RJ Henry - Crop Breeding and Applied Biotechnology, 2021 - SciELO Brasil
… If we can use genomics to identify and characterize these genes selected by humans, we
can develop very efficient genomic tools for breeding for grain quality. Advancing genomic

[HTML][HTML] Chromosome-scale genome assembly provides insights into rye biology, evolution and agronomic potential

MT Rabanus-Wallace, B Hackauf, M Mascher, T Lux… - Nature …, 2021 - nature.com
… To further enhance the agronomic potential of rye, we produced a chromosome-scale
annotated assembly of the 7.9-gigabase rye genome and extensively validated its quality by using …

[HTML][HTML] An improved high-quality genome assembly and annotation of Tibetan hulless barley

X Zeng, T Xu, Z Ling, Y Wang, X Li, S Xu, Q Xu, S Zha… - Scientific Data, 2020 - nature.com
… The available Illumina genome sequencing data that was deposited under SRP055042 4,60
was used in our genome assembly and validation processes. The final genome assembly

[HTML][HTML] Optical and physical mapping with local finishing enables megabase-scale resolution of agronomically important regions in the wheat genome

G Keeble-Gagnère, P Rigault, J Tibbits, R Pasam… - Genome biology, 2018 - Springer
… The value of finished genome regions is demonstrated for … the grain quality phenotype of
fructan carbohydrate grain levels… , high-quality wheat reference genome assembly. The strategy …