Population genomics of transposable element activation in the highly repressive genome of an agricultural pathogen
The activity of transposable elements (TEs) can be an … nodorum, a fungal pathogen of wheat
with efficient RIP. A global … Miniature inverted-repeat transposable elements (MITEs) and …
with efficient RIP. A global … Miniature inverted-repeat transposable elements (MITEs) and …
A devil's bargain with transposable elements in plant pathogens
… Fusarium oxysporum shows even stronger links between TEs and effectors than most
other plant pathogens. Non-autonomous miniature inverted repeat transposable elements (MITEs) …
other plant pathogens. Non-autonomous miniature inverted repeat transposable elements (MITEs) …
A population-level invasion by transposable elements triggers genome expansion in a fungal pathogen
… is driven by the activity of transposable elements (TEs). The … tritici, a major fungal wheat
pathogen. We built a robust map of … genome-wide expansion from the pathogen’s center of origin …
pathogen. We built a robust map of … genome-wide expansion from the pathogen’s center of origin …
A population-level invasion by transposable elements in a fungal pathogen
… is driven by the activity of transposable elements (TEs). The … tritici, a major fungal wheat
pathogen. We built a robust map of … genome-wide expansion from the pathogen’s center of origin …
pathogen. We built a robust map of … genome-wide expansion from the pathogen’s center of origin …
… Genomics of Four Fungal Grass Pathogens in the Genus Zymoseptoria Identify Novel Orphan Genes and Species-Specific Invasions of Transposable Elements
J Grandaubert, A Bhattacharyya… - G3: Genes, Genomes …, 2015 - academic.oup.com
… De novo repeat identification allowed us to show that few families of transposable elements
… of fungal plant pathogens. gene annotation, transposable elements, comparative genomics, …
… of fungal plant pathogens. gene annotation, transposable elements, comparative genomics, …
Host specialization of the blast fungus Magnaporthe oryzae is associated with dynamic gain and loss of genes linked to transposable elements
K Yoshida, DGO Saunders, C Mitsuoka, S Natsume… - BMC genomics, 2016 - Springer
… grisea, that infects the wild grass Digitaria … pathogens than the genes distantly located to
TEs (C2 and C3). From these results, we conclude that presence of transposable elements may …
TEs (C2 and C3). From these results, we conclude that presence of transposable elements may …
Dynamics of transposable elements in recently diverged fungal pathogens: lineage-specific transposable element content and efficiency of genome defenses
… We investigated how past and present transposition events have shaped genome evolution
of a major wheat pathogen and its wild-grass infecting sister-species. Within the genus …
of a major wheat pathogen and its wild-grass infecting sister-species. Within the genus …
Signatures of host specialization and a recent transposable element burst in the dynamic one-speed genome of the fungal barley powdery mildew pathogen
L Frantzeskakis, B Kracher, S Kusch… - BMC genomics, 2018 - Springer
… -pathogenic Ascomycetes, strongly enriched with an unusually high content of transposable
elements … graminis life history and co-evolutionary patterns of the fungal pathogen with grass …
elements … graminis life history and co-evolutionary patterns of the fungal pathogen with grass …
Stress-driven transposable element de-repression dynamics and virulence evolution in a fungal pathogen
… Transposable elements (TEs) are drivers of genome … pathogens are excellent models to
dissect the impact of stress on TEs. The process of plant infection induces stress for the pathogen…
dissect the impact of stress on TEs. The process of plant infection induces stress for the pathogen…
Population-level transposable element expression dynamics influence trait evolution in a fungal crop pathogen
… of transposable elements (TEs) using deep population genomics and transcriptomics analyses
of a fungal plant pathogen with a … and can broadly underpin trait variation in pathogens. …
of a fungal plant pathogen with a … and can broadly underpin trait variation in pathogens. …
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