High-affinity binding of short peptides to major histocompatibility complex class II molecules by anchor combinations.
J Hammer, C Belunis, D Bolin… - Proceedings of the …, 1994 - National Acad Sciences
… We also demonstrate that the anchor residues in class II bindingpeptides are additive and
… in a pool of DR-binding peptides selected from a large, phageexpressed random peptide …
… in a pool of DR-binding peptides selected from a large, phageexpressed random peptide …
Anchor residues in protein–protein interactions
D Rajamani, S Thiel, S Vajda… - Proceedings of the …, 2004 - National Acad Sciences
… clamping of the intermediate into the high-affinity complex. … and the partial affinity triggered
by anchoring interactions are … cementing the high-affinity complex would be larger than that …
by anchoring interactions are … cementing the high-affinity complex would be larger than that …
[HTML][HTML] Crystal structures of two I-Ad–peptide complexes reveal that high affinity can be achieved without large anchor residues
CA Scott, PA Peterson, L Teyton, IA Wilson - Immunity, 1998 - cell.com
… , the peptides do not insert any large anchor residues into the binding pockets of the
shallow IA d binding groove. The previously identified six-residue “core” binding motif of IA d …
shallow IA d binding groove. The previously identified six-residue “core” binding motif of IA d …
A negatively charged anchor residue promotes high affinity binding to the MHC class II molecule I-Ak.
… It is possible that the insertion of large amino acids at the anchor position might have forced
the peptide to roll or shift register in the binding groove.) In this analysis, the anchor residue …
the peptide to roll or shift register in the binding groove.) In this analysis, the anchor residue …
Effects of anchor structure and glycosylation of Fcγ receptor III on ligand binding affinity
… anchor has highest affinity for hIgG1 but lowest affinity for … with a full anchor, other,
nonconserved residues may interact … in 2D affinity of the CD16-IgG binding has a large effect on …
nonconserved residues may interact … in 2D affinity of the CD16-IgG binding has a large effect on …
Prominent role of secondary anchor residues in peptide binding to HLA-A2. 1 molecules
J Ruppert, J Sidney, E Celis, RT Kubo, HM Grey… - Cell, 1993 - cell.com
… In this paper, large … and anchor residues are important for A2.1 binding capacity, the following
analysis was performed. We reasoned that amino acid residues that facilitated high affinity …
analysis was performed. We reasoned that amino acid residues that facilitated high affinity …
Quantitation of peptide anchor residue contributions to class I major histocompatibility complex molecule binding.
Y Saito, PA Peterson, M Matsumura - Journal of Biological Chemistry, 1993 - ASBMB
… anchor residues are necessary for highaffinity binding, and that high-affinity binding occurs
only when anchor … bution of two anchor side chains to binding is unexpectedly large and …
only when anchor … bution of two anchor side chains to binding is unexpectedly large and …
The role of anchor residues in the binding of peptides to HLA‐A* 1101 molecules
Y Chujoh, Y Sobao, K Miwa, Y Kaneko… - Tissue …, 1998 - Wiley Online Library
… Two known HLA-All-restricted cytotoxic T-lymphocyte epitope peptides showed high affinity
… study using a large number of peptides carrying the anchor residues and mutated peptides …
… study using a large number of peptides carrying the anchor residues and mutated peptides …
Augmentation of the affinity of HLA class I‐binding peptides lacking primary anchor residues by manipulation of the secondary anchor residues
P Rovero, S Viganò, S Pegoraro… - Journal of Peptide …, 1995 - Wiley Online Library
… alpha chain residues 114, 147, 152 and 156, but larger P7 … anchor residues endows a
peptide with high affinity to an MHC molecule in the absence of one of the primary anchor residues…
peptide with high affinity to an MHC molecule in the absence of one of the primary anchor residues…
Anchor residue motifs of HLA class-I-binding peptides analyzed by the direct binding of synthetic peptides to HLA class I α chains
… It is applicable to test a large number of HLA allelic products … confirmed the high allele
specificity of the anchor residue … of high-affinity and/or abundant peptides and also of high HLA …
specificity of the anchor residue … of high-affinity and/or abundant peptides and also of high HLA …
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