An evolving view of copy number variants

S Lauer, D Gresham - Current genetics, 2019 - Springer
… GAP1 CNVs are generated at a high rate and can be variable in both size and copy number.
The extent of CNV diversity is surprising given that the majority of CNVs are formed through …

A copy number variation map of the human genome

M Zarrei, JR MacDonald, D Merico… - Nature reviews …, 2015 - nature.com
… The higher percentage of apparent variability in our inclusive map could be explained by
the fact that more samples from a wider range of ethnic backgrounds were included. Moreover, …

Copy number variation: new insights in genome diversity

JL Freeman, GH Perry, L Feuk, R Redon… - Genome …, 2006 - genome.cshlp.org
… in these representative individuals, including CNVs and balanced rearrangements (eg,
inversions), as well as lead to rapid demarcation of boundaries of specific copy number

Large multiallelic copy number variations in humans

RE Handsaker, V Van Doren, JR Berman… - Nature …, 2015 - nature.com
… To further increase the accuracy of absolute copy number determinations, especially at
high copy number, we borrowed information from the population allele frequencies of the …

De novo rates and selection of large copy number variation

A Itsara, H Wu, JD Smith, DA Nickerson… - Genome …, 2010 - genome.cshlp.org
… In the children, eight of nine loci validated as copy number changes. The smallest event, a
33-… the true-positive rate, we were able to validate predicted copy number changes for eight of …

[PDF][PDF] A comprehensive analysis of common copy-number variations in the human genome

KK Wong, RJ deLeeuw, NS Dosanjh, LR Kimm… - The American Journal of …, 2007 - cell.com
variation in the human genome exists in different forms. Recent studies have shown that
variations exist in the human genome at various levels: … , large-scale copy-number variations (…

Copy-number variation in control population cohorts

D Pinto, C Marshall, L Feuk… - Human molecular …, 2007 - academic.oup.com
… Based on the out-of-Africa theory ( 33 ) of modern human origin, higher levels of genetic
variation should exist in the more ancient African populations and less diversity in the younger, …

High rate of disease-related copy number variations in childhood onset schizophrenia

K Ahn, N Gotay, TM Andersen, AA Anvari… - Molecular …, 2014 - nature.com
… Support for the involvement of large copy number variants in the pathogenesis of … PennCNV:
an integrated hidden Markov model designed for high-resolution copy number variation

Accurate and reliable high-throughput detection of copy number variation in the human genome

H Fiegler, R Redon, D Andrews, C Scott… - Genome …, 2006 - genome.cshlp.org
copy number changes was to achieve a low false-positive call rate (<5%) while maximizing
the number … To estimate the false-positive rate, we calculated the number of calls made in the …

Relative impact of nucleotide and copy number variation on gene expression phenotypes

BE Stranger, MS Forrest, M Dunning, CE Ingle… - Science, 2007 - science.org
… The large-scale (typically > 100 kb) copy number variation analyzed here appears to be
associated with about 10 to 25% as many gene expression phenotypes as captured by ∼…