Analysis of copy number variations among diverse cattle breeds
… ranging from 1 kilobase (kb) to 5 megabase (Mb) comprised mainly of copy number
variation (CNV in the form of large-scale insertions and deletions), as well as inversions and …
variation (CNV in the form of large-scale insertions and deletions), as well as inversions and …
Genome-wide detection of human copy number variations using high-density DNA oligonucleotide arrays
D Komura, F Shen, S Ishikawa, KR Fitch… - Genome …, 2006 - genome.cshlp.org
… a large set of reference samples. GIM, which has been used previously for identification of
copy number changes … Subsequent to GIM, SW-ARRAY identifies copy number changes using …
copy number changes … Subsequent to GIM, SW-ARRAY identifies copy number changes using …
Copy number variations and cognitive phenotypes in unselected populations
… of women reaching the highest educational levels—levels 5 through 7. Only 12 women (12.9%)
in the 250 kb ≤ deletion <500 kb group attained these highest educational levels (OR, …
in the 250 kb ≤ deletion <500 kb group attained these highest educational levels (OR, …
Recurrent copy number variations in human induced pluripotent stem cells
K Martins-Taylor, BS Nisler, SM Taapken… - Nature …, 2011 - nature.com
… We did not observe a high incidence of trisomy 12, as … used high-resolution aCGH to identify
smaller regions of variation. We analyzed 25 of the hiPSC lines at varying passage numbers …
smaller regions of variation. We analyzed 25 of the hiPSC lines at varying passage numbers …
Mutational and selective effects on copy-number variants in the human genome
… In this perspective, we focus our analysis on the large (>1 kb) variants identified in recent
genome-wide surveys. Although still incomplete, the available data allow us to assess the …
genome-wide surveys. Although still incomplete, the available data allow us to assess the …
[HTML][HTML] Copy number variation in bipolar disorder
… CNV burden analyses have shown an increased burden of large, rare CNVs in SZ: we
reported a 2.5% higher rate of CNVs larger than 500 kb in SZ compared with controls. Using the …
reported a 2.5% higher rate of CNVs larger than 500 kb in SZ compared with controls. Using the …
Gene copy number variation and common human disease
M Fanciulli, E Petretto, TJ Aitman - Clinical genetics, 2010 - Wiley Online Library
… In the context of autoimmune disease, it is also of interest that high copy number at CCL3L1
has … Similarly, both high and low beta-defensin copy numbers have been associated with …
has … Similarly, both high and low beta-defensin copy numbers have been associated with …
Recurrent DNA copy number variation in the laboratory mouse
… Different species, populations and individuals vary considerably in the copy number of …
of spontaneous copy number variation (CNV) in the laboratory mouse. We used high-resolution …
of spontaneous copy number variation (CNV) in the laboratory mouse. We used high-resolution …
[HTML][HTML] Copy number variations and cancer
… DNA copy number variations (CNVs) are an important component of genetic variation, … The
advent of high-resolution SNP arrays has made it possible to identify CNVs. Characterization …
advent of high-resolution SNP arrays has made it possible to identify CNVs. Characterization …
cn. MOPS: mixture of Poissons for discovering copy number variations in next-generation sequencing data with a low false discovery rate
G Klambauer, K Schwarzbauer, A Mayr… - Nucleic acids …, 2012 - academic.oup.com
… analysis by NGS has the following potential advantages compared with array-based
techniques: (i) estimation of integer copy numbers from NGS data is more accurate for large …
techniques: (i) estimation of integer copy numbers from NGS data is more accurate for large …