Conformational and structural characteristics of peptides binding to HLA-DR molecules.

CM Hill, JD Hayball, AA Allison… - Journal of immunology …, 1991 - journals.aai.org
… In contrast when the latter three peptides were examined, the data indicated that … features
characteristic of the peptides known to elicit HLA-DRlDwl-restricted T cells. When the peptide

Role of the polymorphic residues in HLA-DR molecules in allele-specific binding of peptide ligands.

KW Marshall, AF Liu, J Canales, B Perahia… - … (Baltimore, Md.: 1950 …, 1994 - journals.aai.org
… allele, to insure that the inhibition was primarily measuring the binding characteristics of the
competitor peptide. This was confirmed by showing that the IC,, of unlabeled hemagglutinin …

[HTML][HTML] Quantitative predictions of peptide binding to any HLA-DR molecule of known sequence: NetMHCIIpan

M Nielsen, C Lundegaard, T Blicher… - PLoS computational …, 2008 - journals.plos.org
… to capture general features of the relationship between peptides and HLA sequences and
interpret these in terms of a binding affinity. Such relationships can only by captured if the …

[HTML][HTML] Peptide binding predictions for HLA DR, DP and DQ molecules

P Wang, J Sidney, Y Kim, A Sette, O Lund, M Nielsen… - BMC …, 2010 - Springer
… a large scale dataset of over 17,000 HLA-peptide binding affinities for a set of 11 HLA DP
and DQ alleles. We also expanded our dataset for HLA DR alleles resulting in a total of 40,000 …

Different modes of peptide interaction enable HLA-DQ and HLA-DR molecules to bind diverse peptide repertoires.

L Raddrizzani, T Sturniolo, J Guenot… - … (Baltimore, Md.: 1950 …, 1997 - journals.aai.org
… Results from the second set of experiments, in which we compared the binding characteristics
of CLIP to DQ7, DQ9, and DR molecules, allowed similar conclusions: substitution of CLIP …

A Comparative Analysis of the Peptide Repertoires of HLADR Molecules Differentially Associated With Rheumatoid Arthritis

E Scholz, A Mestre‐Ferrer, X Daura… - Arthritis & …, 2016 - Wiley Online Library
… of the peptide repertoires bound to HLADR molecules that are dif… to define structural features
of the shared peptides. Methods. … To evaluate similar features of the common peptides, we …

Promiscuous and allele-specific anchors in HLA-DR-binding peptides

J Hammer, P Valsasnini, K Tolba, D Bolin, J Higelin… - Cell, 1993 - cell.com
… We have previously described a novel approach to define sequence characteristicspeptide
library expressed on the surface of filamentous phage for binding to human DR molecules (…

Peptide-Based Molecular Analyses of HLA class II-Associated Susceptibility to Autoimmune Diseases

Y Nishimura, M Oiso, S Fujisao, T Kanai… - International reviews …, 1998 - Taylor & Francis
… Positions and characteristics of amino acid residues important for HLA-I1 binding and …
peptides bound by HLA-DR molecules between DRBl*O405 and DRBl*O406 to search for peptide-…

Editing of the HLADRpeptide repertoire by HLA‐DM.

H Kropshofer, AB Vogt, G Moldenhauer… - The EMBO …, 1996 - embopress.org
peptides other than CLIP and thereby modifies the peptide repertoire presented to T cells.
Here we report that DM can release a variety of peptides from HLA-DR molecules. … features of …

Specificity and promiscuity among naturally processed peptides bound to HLA-DR alleles.

RM Chicz, RG Urban, JC Gorga, DA Vignali… - The Journal of …, 1993 - rupress.org
… the HLA-DR molecules in this study were incubated with biotinylated synthetic peptide and
… Conformational and structural characteristics of peptides binding to HLA-DR molecules. J. …