… analysis on multi-omics data of six HPV-positive and three HPV-negative cell lines. Through
… Our results suggest that HPV integration generates cellular SEs that function as ecDNA to …

… By mining data from multi-omics analysis, we have fully and systematically described IATGs
in many samples from thirtythree kinds of cancer types. Our ndings not only highlight the …

… The ggplot2 package was used for visualization analysis with a threshold of |log2 fold-…
statistical analysis with the cluster Profiler package for GO and KEGG enrichment analysis of DEGs…

… the HPV-host interactions. In addition, multi-omics analyses were performed to characterize
the key mediator of specificity protein 1 (Sp1) between HPV-host interactions. We found that …

… In this study, we focused on examining cellular heterogeneity and HPV infection/integration …
and HPV integration analysis for 93,589 cells from 20 patients. This analysis revealed the …

… For the analysis, we kept only protein-coding genes with HPV insertions that were present
on Gencode, removing 64 genes that were not found. Certain gene names were changed to …

… Decision curve analysis also revealed a better net benefit of multi-omics model. … that
identification of HPV status was within the ability of histopathological images analysis, which needs …

… In summary, the multi-omics integrative analysis represents a valuable and potent tool that
offers a complementary and comprehensive understanding of ESCC, thereby providing an …

… In this paper, basing on 1 H-NMR metabonomic and bioinformatics analysis, an integrated
multi-omics analysis including metabonomics and bioinformatics was performed. We propose …

… risk compared with former smokers using multivariate Cox regression analysis [[9]]. Another
study … were not considered, including human papillomavirus (HPV) status associated with the …