Analysis of the structure and dynamics of human serum albumin

TRC Guizado - Journal of molecular modeling, 2014 - Springer
… the human serum albumin were found in a cluster analysis of … from molecular dynamics)
principal component analysis is … We additionally performed molecular dynamics simulations …

A molecular dynamics study of human serum albumin binding sites

R Artali, G Bombieri, L Calabi, A Del Pra - Il Farmaco, 2005 - Elsevier
… In this respect, the purpose of the current work was to analyze in greater detail the dynamic
properties of HSA, starting from the crystal structure [13], to get information on the structural …

Molecular dynamics simulations of human serum albumin and role of disulfide bonds

MM Castellanos, CM Colina - … Journal of Physical Chemistry B, 2013 - ACS Publications
Atomistic molecular dynamics simulations of human serum albumin in the presence and
absence of disulfide bonds are presented. Simulations of 70 ns duration provide information on …

… the combination of erlotinib hydrochloride, an anticancer drug, and human serum albumin: Spectroscopic, molecular docking, and molecular dynamic analyses

S Shahraki, Z Razmara, HS Delarami… - …, 2023 - Wiley Online Library
Molecular docking results indicated that the Erlo has more … Molecular dynamics simulation
analysis showed that the … , molecular docking and molecular dynamics techniques. However, …

Exploring how structural and dynamic properties of bovine and canine serum albumins differ from human serum albumin

S Ketrat, D Japrung, P Pongprayoon - … of Molecular Graphics and Modelling, 2020 - Elsevier
… We thus employed Molecular Dynamics (MD) simulations to reveal structural and dynamic
… BSA and CSA were analysed in comparison with that of human serum albumin (HSA) from …

… mechanism of alogliptin benzoate with human serum albumin: Insights from spectroscopy, microcalorimetry, and molecular docking and molecular dynamics analyses

S Zhang, R Gan, L Zhao, Q Sun, H Xiang… - … Acta Part A: Molecular …, 2021 - Elsevier
Molecular docking analysis and thermodynamic parameters demonstrated that this … via
molecular dynamics analysis in the simulated environment. On the basis of molecular docking, …

… mechanisms between myricitrin and human serum albumin: Insights from multi-spectroscopic, molecular docking and molecular dynamic simulation analyses

T Niu, X Zhu, D Zhao, H Li, P Yan, L Zhao… - … Acta Part A: Molecular …, 2023 - Elsevier
human serum albumin (HSA) was investigated using spectroscopic methods, molecular docking
techniques, and molecular dynamic … Competitive binding and molecular docking studies …

Destabilization of human serum albumin by ionic liquids studied using enhanced molecular dynamics simulations

VW Jaeger, J Pfaendtner - The Journal of Physical Chemistry B, 2016 - ACS Publications
… We used molecular dynamics and metadynamics to analyze the interactions of [BMIM][BF
4 … We have shown that some limitations of molecular dynamics, with regard to proteins …

Spectroscopic analysis, docking and molecular dynamics simulation of the interaction of cinnamaldehyde with human serum albumin

O Soltanabadi, MS Atri, M Bagheri - Journal of Inclusion Phenomena and …, 2018 - Springer
Human serum albumin (HSA) is one of the blood plasma proteins, which plays an important
… using molecular docking softwares. On the other hand, molecular dynamics simulations …

Exploration of human serum albumin binding sites by docking and molecular dynamics flexible ligand–protein interactions

O Deeb, MC Rosales‐Hernández… - Biopolymers …, 2010 - Wiley Online Library
… –protein interactions with a high level of molecular detail, theoretical binding energy … analyze
biological processes rapidly and efficiently. These also enable the calculation of molecular