Escherichia coli strains are widely used in academic research and biotechnology. New
technologies for quantifying strain-specific differences and their underlying contributing factors …

… coli would be helpful for the community. We constructed a database called E. coli integrated
network (EcoIN) by integrating known molecular interaction information from databases and …

… expression and regulation knowledge base for Escherichia coli. The expression component
is … We also integrated 1675 curated, publicly-available transcriptomes into the resource. We …

… 34 proteins directly bound by silver ions to be identified in Escherichia coli. By using
integrated omic approaches, including metalloproteomics, metabolomics, bioinformatics, and …

In 2014–2016, we conducted a cross-sectional survey in 115 sheep, 104 beef and 82 dairy
cattle herds to estimate Shiga toxin-producing Escherichia coli (STEC) prevalence, and …

… The aims of our analysis were as follows: (1) to integrate the independent datasets, which
will help to overcome the limitations caused by sample size and statistical method bias; (2) to …

… This study provides the first comprehensive insights into the molecular takeover of E. coli by
bacteriophage T4. This data set represents a valuable resource for future studies seeking to …

… A thermodynamically inconsistent reaction identified in the integrated analysis corresponded
to acetyl-CoA C-acetyltransferase (atoB) for both the anaerobic and aerobic growth …

… RT-qPCR validation of transcriptomic analysis results To validate the results from the
integrated analysis, RT-qPCR was conducted. Fifteen genes involved in LPS, phospholipid, and …

… data, genetic knockouts, and network component analysis (NCA) to map the initial isobutanol
response network of Escherichia coli under aerobic conditions. NCA revealed profound …