Integrative analysis of genome-wide loss of heterozygosity and monoallelic expression at nucleotide resolution reveals disrupted pathways in triple-negative breast …
… Our results therefore describe the first nucleotide-resolution genome/transcriptome-wide
integrated analysis of LOH and MAE in a population of breast tumors and the landscape of allele…
integrated analysis of LOH and MAE in a population of breast tumors and the landscape of allele…
[HTML][HTML] … and copy number aberrations in primary glioblastomas defined by integrated analysis of allelic ratios, signal ratios and loss of heterozygosity using 500K SNP …
PJ Gardina, KC Lo, W Lee, JK Cowell, Y Turpaz - BMC genomics, 2008 - Springer
… This observation led to the suggestion that many of the analyzed chromosomes might
have a baseline CN greater than two. Here, we perform an integrated analysis of GBM tumors …
have a baseline CN greater than two. Here, we perform an integrated analysis of GBM tumors …
Integrated analysis of copy number and loss of heterozygosity in primary breast carcinomas using high-density SNP array
HC Ching, R Naidu, MK Seong… - … journal of oncology, 2011 - spandidos-publications.com
… The integration analysis of copy number changes and LOH alterations was conducted via …
The integration analysis revealed a sum of 73 MCORs in this category, in which these regions …
The integration analysis revealed a sum of 73 MCORs in this category, in which these regions …
Integrated analysis of copy number alterations and loss of heterozygosity in human pancreatic cancer using a high-resolution, single nucleotide polymorphism array
LJ Lin, Y Asaoka, M Tada, M Sanada, Y Nannya… - Oncology, 2008 - karger.com
… Methods: We analyzed genome-wide copy number alterations and loss of heterozygosity
(LOH) in 25 established pancreatic cancer cell lines using a high-density single nucleotide …
(LOH) in 25 established pancreatic cancer cell lines using a high-density single nucleotide …
[HTML][HTML] Loss of heterozygosity: what is it good for?
… Loss of heterozygosity (LOH) is a common genetic event in cancer development, and is
known to be involved in the somatic loss of wild-type alleles in many inherited cancer syndromes…
known to be involved in the somatic loss of wild-type alleles in many inherited cancer syndromes…
Loss of heterozygosity analysis in malignant gliomas
M Mizoguchi, D Kuga, Y Guan, N Hata, A Nakamizo… - Brain tumor …, 2011 - Springer
… Some of the identified molecular markers—such as loss of heterozygosity (LOH) on …
This review summarizes recent developments in the molecular analysis of malignant glioma…
This review summarizes recent developments in the molecular analysis of malignant glioma…
[HTML][HTML] Combined array-comparative genomic hybridization and single-nucleotide polymorphism-loss of heterozygosity analysis reveals complex genetic alterations …
… marker analysis for the detection of loss of heterozygosity (LOH). … Integration of these 3
platforms allows detection of genomic … , integrated copy number and gene expression analyses …
platforms allows detection of genomic … , integrated copy number and gene expression analyses …
[HTML][HTML] Loss of heterozygosity of essential genes represents a widespread class of potential cancer vulnerabilities
… We then integrated each of these analyses to characterize the potential druggability landscape
of these protein-altering GEMINI vulnerabilities. Every variant was given a score from 0 to …
of these protein-altering GEMINI vulnerabilities. Every variant was given a score from 0 to …
Progress in concurrent analysis of loss of heterozygosity and comparative genomic hybridization utilizing high density single nucleotide polymorphism arrays
X Zhou, NP Rao, SW Cole, SC Mok, Z Chen… - Cancer genetics and …, 2005 - Elsevier
… limited input DNA has further enhanced the power of concurrent LOH and CGH analysis.
The integration of these technologies permits genome-wide profiling of a selected pure disease …
The integration of these technologies permits genome-wide profiling of a selected pure disease …
Allele-specific loss of heterozygosity in multiple colorectal adenomas: toward an integrated molecular cytogenetic map II
X Mao, RA Hamoudi, IC Talbot, M Baudis - Cancer genetics and …, 2006 - Elsevier
… of allele-specific loss of heterozygosity (LOH) for the localization of CRC susceptibility genes,
we initially conducted a genome-wide allelotyping analysis of 48 adenomas from a patient …
we initially conducted a genome-wide allelotyping analysis of 48 adenomas from a patient …
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