Intracellular mechanics: connecting rheology and mechanotransduction

S Mathieu, JB Manneville - Current opinion in cell biology, 2019 - Elsevier
… In this review, we first discuss the latest findings in intracellular … [3] and intracellular organelles
participate to intracellular … membrane to the cell interior and intracellular organelles. Here …

Multi-target recognition in intracellular regulation networks

T Zhou, S Li - Tsinghua Science and Technology, 2007 - ieeexplore.ieee.org
… multiple targets for a given intracellular regulation network described by ordinary differential
… with increasing species number in an intracellular regulation network. An estimate is derived …

Palmitoylation of intracellular signaling proteins: regulation and function

JE Smotrys, ME Linder - Annual review of biochemistry, 2004 - annualreviews.org
… palmitoylation in the function and regulation ofintracellular signaling molecules emphasized.
regulation of protein palmitoylation, focusing on intracellular proteins that participate in cell

Methods for Structural Inference and Functional Module Identification in Intracellular Networks

M Manioudaki, E Tzamali, M Reczko… - Bioinformatics for Systems …, 2009 - Springer
… of intracellular processes. Searching for functional modules is thus a critical step in illuminating
intracellular networks and their … of intracellular networks will be discussed in this chapter. …

Modelling heterogeneous intracellular networks at the cellular scale

AC Babtie - Current Opinion in Systems Biology, 2019 - Elsevier
… The complexity of interconnected intracellular processes is … to help us gain insight into
cellular function. Here, we focus on … on intracellular networks, and allow simulation of network

MIRELLA: a mathematical model explains the effect of microRNA-mediated synthetic genes regulation on intracellular resource allocation

F Cella, G Perrino, F Tedeschi, G Viero… - Nucleic Acids …, 2023 - academic.oup.com
… miRNA (MI) RolE on intracellular resource aLLocAtion. We report that … regulatory interaction
of miRNA-based synthetic networks, potentially relevant also in endogenous gene regulation

Subcellular dynamics of multifunctional protein regulation: mechanisms of GAPDH intracellular translocation

MA Sirover - Journal of cellular biochemistry, 2012 - Wiley Online Library
… Although this review focuses on the normal and the “cellular pathological” regulation of
GAPDH subcellular translocation, significant changes may occur in specific disease states, most …

Intracellular peptides as natural regulators of cell signaling

FM Cunha, DA Berti, ZS Ferreira, CF Klitzke… - Journal of biological …, 2008 - ASBMB
… to the intracellular milieu can regulate cellular functions mediated by protein interactions
suggests new putative roles for these molecules in gene regulation, metabolism, cell signaling, …

Ion channels, guidance molecules, intracellular signaling and transcription factors regulating nervous and vascular system development

T Akita, T Kumada, S Yoshihara, J Egea… - The journal of …, 2016 - Springer
cellular phenomena and molecules. In this review, we focus on the functions of ion channels,
intracellular … are applicable to the development of vascular networks as well. Our aim is to …

Towards experimental design using a Bayesian framework for parameter identification in dynamic intracellular network models

A Kramer, N Radde - Procedia Computer Science, 2010 - Elsevier
… is to reveal regulatory mechanisms underlying complex behavior of intracellular networks at
the … class to describe the dynamic of signaling networks, metabolic pathways or regulatory