Identification of genes regulated by the MvaT‐like paralogues TurA and TurB of Pseudomonas putida KT2440

F Renzi, E Rescalli, E Galli… - Environmental …, 2010 - Wiley Online Library
… specific co-regulators of the upper TOL operon for toluene … indicate that TurA is the master
regulator of TurB as well as … superimposed to the regulatory network governing this family …

Chemical reactivity drives spatiotemporal organisation of bacterial metabolism

V de Lorenzo, A Sekowska… - FEMS microbiology …, 2015 - academic.oup.com
In this review, we examine how bacterial metabolism is shaped by chemical constraints
acting on the material and dynamic layout of enzymatic networks and beyond. These are …

[HTML][HTML] B-lymphoblastic lymphomas evolving from follicular lymphomas co-express surrogate light chains and mutated gamma heavy chains

…, BJ Biemond, MECM Oud, EJM Schilder-Tol… - The American Journal of …, 2016 - Elsevier
… PAX5, a master regulator of B-cell lineage commitment and differentiation 44 is among the
… Neither did we detect mutations in IKZF1 in TF3 (data not shown), another master regulator

Small RNAs in the control of RpoS, CsgD, and biofilm architecture of Escherichia coli

F Mika, R Hengge - RNA biology, 2014 - Taylor & Francis
… to envision all the regulatory networks that shape this biofilm … master regulator for biofilm
formation, in particular, for macrocolony biofilms at ambient temperature. As the master regulator

Regulation of biofilm components in Salmonella enterica serovar Typhimurium by lytic transglycosylases involved in cell wall turnover

C Monteiro, X Fang, I Ahmad, M Gomelsky… - Journal of …, 2011 - Am Soc Microbiol
… is regulated by several networks which sense multiple … due to the deletion of the Tol system
resulted in the downregulation … cell wall turnover to the master regulator of biofilm formation. …

The impact of succinate trace on pWW0 and ortho-cleavage pathway transcription in Pseudomonas putida mt-2 during toluene biodegradation

A Tsipa, M Koutinas, SI Vernardis, A Mantalaris - Bioresource technology, 2017 - Elsevier
… The TOL regulatory network of P. putida mt-2 includes the molecular toolbox required for …
of Pu in the TOL pathway, which is up-regulated by XylR a , the master regulator of TOL. In the …

Role of Cyclic Di‐GMP in the Regulatory Networks of Escherichia coli

R Hengge - The Second Messenger Cyclic Di‐GMP, 2010 - Wiley Online Library
… control cascade directed by the master regulator FlhDC (21) … These master regulators receive
major input from two other … the global signaling and regulatory network of the cell is already …

Deconvolution of gene expression noise into physical dynamics of cognate promoters

A Goñi-Moreno, I Benedetti, J Kim, V Lorenzo - bioRxiv, 2015 - biorxiv.org
… In supplementary Text S1 we detail the dynamics of the full TOL network and specify … regulator
bound (hour −1 ). The full set of reactions and rates corresponding to the TOL network are …

Transcription factors and microRNA interplay: a new strategy for crop improvement

S Jangra, V Chaudhary, NR Yadav - Transcriptional and post …, 2018 - books.google.com
… factors are master regulators of the … networks that are controlled by transcription factors
and microRNAs, which coordinate gene expression. Transcription factors, the key regulators of …

Deciphering the intricate hierarchical gene regulatory network: unraveling multi-level regulation and modifications driving secondary cell wall formation

Z Wei, H Wei - Horticulture Research, 2024 - academic.oup.com
… by a hierarchical gene regulatory network (HGRN), our … Additionally, we revealed many
network motifs including feed-… regulator of PtrMYB21, therefore positively regulating SCW …