Gut microbiota as an epigenetic regulator: pilot study based on whole-genome methylation analysis

H Kumar, R Lund, A Laiho, K Lundelin, RE Ley… - MBio, 2014 - Am Soc Microbiol
… a significant role in the epigenetic regulation of immune and intestinal … epigenetic modifications.
As a first step, we compared the fecal microbiota composition to blood DNA methylation

Epigenetic regulation of gene expression in cancer: techniques, resources and analysis

LT Kagohara, GL Stein-O'Brien, D Kelley… - Briefings in …, 2018 - academic.oup.com
… -throughput approaches for epigenetic mapping from DNA methylation, chromatin modification
… Moreover, robust bioinformatics algorithms for DNA methylation analysis with nanopore …

Genome-wide epigenetic regulation of miRNAs in cancer

C Baer, R Claus, C Plass - Cancer research, 2013 - AACR
methylation analysis revealed an extensive influence of DNA hyper- as well as hypomethylation
on miRNA regulation… contribution of epigenetic mechanisms to the regulation of miRNA …

[HTML][HTML] Analysis of DNA methylation in a three-generation family reveals widespread genetic influence on epigenetic regulation

J Gertz, KE Varley, TE Reddy, KM Bowling, F Pauli… - PLoS …, 2011 - journals.plos.org
methylation by analyzing methylation levels in a three-generation family as well as unrelated
individuals. By following DNA methylation … role in determining DNA methylation than the …

DNA methyltransferases and epigenetic regulation in bacteria

S Adhikari, PD Curtis - FEMS microbiology reviews, 2016 - academic.oup.com
… emphasis on how their DNA methylation participates in epigenetic regulation in bacteria. …
Unfortunately, these methods are not applicable for global methylation analysis. However, …

DNA methylation and gene expression profiles characterize epigenetic regulation of lncRNAs in colon adenocarcinoma

Z Li, H Tan, H Yu, Z Deng, X Zhou… - Journal of Cellular …, 2020 - Wiley Online Library
… of lncRNA in COAD and identified 20 epigenetically upregulated lncRNAs. Our findings
will shed new light on the epigenetic regulation of lncRNA expression by DNA methylation. …

Epigenetic regulation of Foxp3 expression in regulatory T cells by DNA methylation

G Lal, N Zhang, W Van Der Touw, Y Ding… - The Journal of …, 2009 - journals.aai.org
… than peripheral regulation of Foxp3 expression. Epigenetic regulation by methylation of 5′-…
CpG methylation of the promoter down-regulates transcription by preventing the binding of …

[HTML][HTML] Epigenetic regulation of myofibroblast differentiation by DNA methylation

B Hu, M Gharaee-Kermani, Z Wu, SH Phan - The American journal of …, 2010 - Elsevier
… We analyzed the extent and regulation of DNA methylation of … of three CpG islands that
were methylated at different levels in … Finally, in vitro DNA methylation of the α-SMA promoter …

[HTML][HTML] Epigenetic regulation of hematopoiesis by DNA methylation

AV Gore, B Athans, JR Iben, K Johnson, V Russanova… - elife, 2016 - elifesciences.org
… an epigenetic mechanism supporting the maintenance of hematopoietic cell fate via DNA
methylation-… Our findings reveal a previously unknown epigenetic mechanism regulating HSPC …

[HTML][HTML] Epigenetic regulation of CpG promoter methylation in invasive prostate cancer cells

LA Mathews, EM Hurt, X Zhang, WL Farrar - Molecular cancer, 2010 - Springer
… environmental carcinogens that alter normal regulation. If the cancer is … In order to study the
epigenetic regulation of these … They demonstrate increases in the stem cell regulators CD44, …