… miRNA expression levels in fish in response to hypoxia. We performed an integrative analysis
of these data and obtained the complete set of hypoxia-responsive miRNAs/mRNAs, their …

… inside of the sequence were allowed. For the miRNAs identified in this study, the
conservation analysis was conducted through comparisons with 40 species listed in S1 Table. …

… In this study, integrated analysis of mRNA and miRNA was performed on gonad tissue to
elucidate the molecular mechanisms of sex determination and differentiation in the dark sleeper…

… miRNA is known to regulate up to several hundreds coding genes, thus the integrated analysis
of miRNA … Unfortunately, the integrated analysis is challenging since it needs to consider …

… Integrated analysis of microRNA, mRNA and ChIP-seq data in a model cell line supports the
hypothesis that microRNA … of HIF binding sites at microRNA genomic loci associated with up-…

… In this study, Illumina sequencing was employed to identify the mRNAs and miRNAs involved
in … Based on the zebrafish genome, miRNA-seq identified a total of 355 miRNAs, which …

… be helpful to identify the functional miRNA-mRNA interaction pairs … integrated analysis of
differentially expressed miRNAs and mRNAs, we found several important regulatory miRNAs …

… C2H2 zinc-finger family members are key targets of DE miRNAs. The integrative analysis
between miRNAs and mRNAs demonstrates the regulations of miRNAs on nearly four …

… the regulation of miRNA expression by miRNA-sequencing (miRNA-seq) and, through …
study, using miRNA-seq, we limited our functional analysis to the top 100 expressed miRNAs (by …

… on single omics analyses; there is a lack of systematic multi-omics research. In the current
study, intestinal mRNA-seq and microRNA (miRNA)-seq analyses of Marsupenaeus japonicus …