On the performance of continuum solvation methods. A comment on “Universal approaches to solvation modeling”
… measure of the … solvation free energies. In essence, IEF-PCM/MST computations were
performed at both HF and DFT (B3LYP) levels of theory using the 6-31G(d) basis and molecular …
performed at both HF and DFT (B3LYP) levels of theory using the 6-31G(d) basis and molecular …
Solvation thermodynamics of organic molecules by the molecular integral equation theory: approaching chemical accuracy
EL Ratkova, DS Palmer, MV Fedorov - Chemical reviews, 2015 - ACS Publications
… associated with molecular solvation with a focus on solvation free … Measure SFE The
common experimental techniques to measure the solvation free energies of organic molecules …
common experimental techniques to measure the solvation free energies of organic molecules …
Evaluating performance of the approximate 3D-RISM-KH molecular solvation theory for solvation free energies in alkanes and alkane-water partition coefficients
D Roy, A Kovalenko - Journal of Molecular Liquids, 2023 - Elsevier
… -based 3D-RISM molecular solvation theory with the Kovalenko-Hirata (… molecules. The
first two members of the alkane family, methane and ethane, was studied using the RISM theory, …
first two members of the alkane family, methane and ethane, was studied using the RISM theory, …
A universal approach to solvation modeling
CJ Cramer, DG Truhlar - Accounts of chemical research, 2008 - ACS Publications
… free energies of solvation of molecular solutes. Among other … first solvation shell, and A k is
basically a continuous measure of … , with particularly good performance for nonaqueous data …
basically a continuous measure of … , with particularly good performance for nonaqueous data …
Performance of SM8 on a test to predict small-molecule solvation free energies
AC Chamberlin, CJ Cramer… - The Journal of Physical …, 2008 - ACS Publications
… solvation model is applied to a 17-molecule test set proposed by Nicholls et al. (J. Med. …
2008, 51, 769) to predict free energies of solvation. With the M06-2X density functional, the 6-31G…
2008, 51, 769) to predict free energies of solvation. With the M06-2X density functional, the 6-31G…
Towards a critical evaluation of an empirical and volume-based solvation function for ligand docking
HS Muniz, AS Nascimento - PLoS One, 2017 - journals.plos.org
… a curated database of solvation free energies for small molecules. Since the SV … solvation
correction useful in the context of molecular docking? It definitely is! We tested the performance …
correction useful in the context of molecular docking? It definitely is! We tested the performance …
Computations of absolute solvation free energies of small molecules using explicit and implicit solvent model
D Shivakumar, Y Deng, B Roux - Journal of Chemical Theory and …, 2009 - ACS Publications
… solvation free energies for small molecules using two popular fixed charge force fields that
are commonly used as a general force field for small molecules, … evaluated the performance of …
are commonly used as a general force field for small molecules, … evaluated the performance of …
How accurate are continuum solvation models for drug-like molecules?
… calibrated towards small-molecule solvation data. Instead, it … Apparently, the improved
performance for small molecule is … is a better measure of the accuracy of the continuum solvation …
performance for small molecule is … is a better measure of the accuracy of the continuum solvation …
Performance of SM6, SM8, and SMD on the SAMPL1 test set for the prediction of small-molecule solvation free energies
AV Marenich, CJ Cramer… - The Journal of Physical …, 2009 - ACS Publications
… , and SMD on the remaining 56 molecules are 2.4, 2.6, and 2.5 … the target solvation free
energies for these molecules may be … As a final error measure, we note that SM6, SM8, and SMD …
energies for these molecules may be … As a final error measure, we note that SM6, SM8, and SMD …
Accurate first principles calculation of molecular charge distributions and solvation energies from ab initio quantum mechanics and continuum dielectric theory
DJ Tannor, B Marten, R Murphy… - Journal of the …, 1994 - ACS Publications
… We evaluated this term in the present paper by fitting a straight line to the experimental
vacuum to watersolvation free energies obtained from Ben-Naim and Marcus26 for a series of …
vacuum to watersolvation free energies obtained from Ben-Naim and Marcus26 for a series of …
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