… of network attractors (Bornholdt, 2008). This analysis allowed us to identify and assess the
TOL … We discovered that the inner logic structure of the TOL network restricts the expression of …

… In this work, we report one strategy to overcome the constraints imposed by the natural
architecture of the TOL network on the function of the XylR/Pu regulatory node of the plasmid. To …

… (b) The extant TOL network of P. putida mt-2 for metabolization of m-xylene. The system has
two operons: upper and lower, expressed from the Pu and Pm promoters, respectively. The …

… control network of the TOL plasmid pWW0 born by Pseudomonas putida mt-2 for biodegradation
of m-… In order to penetrate the underlying logic of such a network, which controls a major …

… of the TOL plasmid pWW0 of Pseudomonas putida mt-2 has … induction of the meta TOL
operon by m-xylene needs the build-… putida mt-2 to direct addition of m-toluate. This allows the …

… Response of the TOL network to gratuitous induction and to 3MBz To complete the picture
of the response of the TOL network to its canonical substrate, m-xylene, we examined the …

… metabolic and regulatory components of the TOL network and visualization of transcripts
from either the upper or the lower operons of the system. (A) In the presence of m-xylene, XylR (…

… bacteria confront m-xylene only. We make the case that this is not a casual occurrence but
that such performance encoded in the TOL network optimizes the adaptation of P. putida mt-2 …

… of the TOL (pWW0) plasmid of Pseudomonas putida mt-2, involved in the metabolism of m-xylene,
with the growth kinetics of the microorganism to predict the biodegradation of m-…

… network of the TOL plasmid pWW0 of the soil bacterium Pseudomonas putida mt-2 for
catabolism of m-… To gain an insight into the inner layout of this network a logic model of the TOL …