Fossil Calibration of Molecular Divergence Infers a Moderate Mutation Rate and Recent Radiations for Pinus

A Willyard, J Syring, DS Gernandt… - … Biology and Evolution, 2007 - academic.oup.com
… inferred using calibrations outside of Pinus), we conclude that the 85 MYA calibration at the
… refinements in age and mutation rate estimates will require a synthetic examination of pine …

[HTML][HTML] A post-pleistocene calibrated mutation rate from insect museum specimens

G Ney, K Frederick, J Schul - PLoS Currents, 2018 - ncbi.nlm.nih.gov
Rates can be calibrated using nodes dated from fossils 16 and from biogeographic …
calibration of an intraspecific mutation rate at a very recent timescale. Evolutionary rates calibrated

Appropriate assignment of fossil calibration information minimizes the difference between phylogenetic and pedigree mutation rates in humans

RT Capellão, EM Costa-Paiva, CG Schrago - Life, 2018 - mdpi.com
… We argue, therefore, that estimates of human mutation rates behaved … fossil calibration
information. Although we analyzed an example from primates, incorrect assignment of calibration

Beyond fossil calibrations: realities of molecular clock practices in evolutionary biology

CA Hipsley, J Müller - Frontiers in genetics, 2014 - frontiersin.org
fossil calibrations. Particularly for groups whose biological properties (eg, mutation rate, …
multiple sources, ranging from mutation rates measured in pedigree and laboratory lines, to …

Calibrating the human mutation rate via ancestral recombination density in diploid genomes

M Lipson, PR Loh, S Sankararaman, N Patterson… - PLoS …, 2015 - journals.plos.org
mutation rate can be estimated based on the divergence time of the genomes, if this can
be confidently inferred from fossil … : we calibrate the mutation rate against the rate of meiotic …

Divergence Times in Caenorhabditis and Drosophila Inferred from Direct Estimates of the Neutral Mutation Rate

AD Cutter - Molecular biology and evolution, 2008 - academic.oup.com
… Here, I illustrate internal calibration in these groups with direct estimates of the mutation rate
from … is that taxa with poor fossil preservation must rely on calibrations from distantly related …

Revising the human mutation rate: implications for understanding human evolution

A Scally, R Durbin - Nature Reviews Genetics, 2012 - nature.com
… direct measurements of the mutation rate in modern humans … of that previously derived from
fossil calibration, and this has … mutation rate in relation to the timescale of human evolution. …

Mitogenomic phylogeny and fossil-calibrated mutation rates for all F-and M-type mtDNA genes of the largest freshwater mussel family, the Unionidae (Bivalvia)

A Zieritz, E Froufe, I Bolotov… - Zoological Journal of …, 2021 - academic.oup.com
… of a comprehensive phylogeny and mutation rates for this fauna. … We calculate substitution
rates for the mitogenome, the 13 … , based on a fossil-calibrated, mitogenomic phylogeny of the …

Time‐dependent rates of molecular evolution

SYW Ho, R Lanfear, L Bromham, MJ Phillips… - Molecular …, 2011 - Wiley Online Library
… the challenges in calibrating estimates of molecular rates, … ) mutation rates and older
calibrations giving rate estimates … In most cases, calibrations based on the fossil record are at least …

The Impact of Fast Radiation on the Phylogeny of Bactrocera Fruit Flies as Revealed by Multiple Evolutionary Models and Mutation Rate-Calibrated Clock

F Valerio, N Zadra, O Rota-Stabelli, L Ometto - Insects, 2022 - mdpi.com
… type of calibrations employed. Here we employed a strategy based on a calibration that
combined fossil data and mutation rate, … We also employed a mutation rate prior [55] for the 4-fold …