Nature and magnitude of aromatic base stacking in DNA and RNA: Quantum chemistry, molecular mechanics, and experiment
J Šponer, JE Šponer, A Mládek, P Jurečka… - …, 2013 - Wiley Online Library
… Base stacking is a major interaction … , base stacking has been extensively studied by
experimental and theoretical methods. Advanced quantum‐chemical calculations clarified that base …
experimental and theoretical methods. Advanced quantum‐chemical calculations clarified that base …
Nature of base stacking: reference quantum‐chemical stacking energies in ten unique B‐DNA base‐pair steps
J Šponer, P Jurečka, I Marchan… - Chemistry–A …, 2006 - Wiley Online Library
… reference data, while relative discrepancies between quantum‐chemical (QM) and force‐field …
the vertical separation of base pairs predicted by quantum chemistry and derived from …
the vertical separation of base pairs predicted by quantum chemistry and derived from …
Molecular interactions of nucleic acid bases. A review of quantum-chemical studies
J Šponer, P Hobza - Collection of Czechoslovak chemical …, 2003 - cccc.uochb.cas.cz
… Ab initio quantum-chemical calculations with inclusion of electron correlation significantly …
and energies of hydrogen bonded base pairs, nature of base stacking, interactions between …
and energies of hydrogen bonded base pairs, nature of base stacking, interactions between …
Quantum-chemical cluster models of acid-base sites of oxide catalysts
GM Zhidomirov, VB Kazansky - Advances in catalysis, 1986 - Elsevier
… as the objects of the first systematical quantum-chemical calculations. These compounds do
… cluster models for quantum-chemical computations. The covalent nature of these structures …
… cluster models for quantum-chemical computations. The covalent nature of these structures …
Hydrogen Bonding and Stacking of DNA Bases: A Review of Quantum-chemical ab initio Studies
J Šponer, J Leszczynski, P Hobza - Journal of Biomolecular …, 1996 - Taylor & Francis
… chemistry/sanna/jbsd.html http://www.albany.edu/chemistry/sarma/sponar.html Ab initio
quantum-chemical … bases, and to characterize the nature of the base-base interactions. Although …
quantum-chemical … bases, and to characterize the nature of the base-base interactions. Although …
Unnatural covalent DNA base pairing: Quantum chemical study
ES Kryachko, MT Nguyen - The Journal of Physical Chemistry A, 2002 - ACS Publications
… , which might have an impact on a further development of the covalently bonded base-pair
architecture. We also consider new covalent base pairs as analogues of Gao−Orgel model. …
architecture. We also consider new covalent base pairs as analogues of Gao−Orgel model. …
Intermolecular CH··· O/N H-bonds in the biologically important pairs of natural nucleobases: a thorough quantum-chemical study
OO Brovarets', YP Yurenko… - Journal of Biomolecular …, 2014 - Taylor & Francis
… This study aims to cast light on the physico-chemical nature … using a comprehensive
quantum-chemical approach. As a … the-art quantum-chemical techniques along with quantum …
quantum-chemical approach. As a … the-art quantum-chemical techniques along with quantum …
Chemical reactivity as described by quantum chemical methods
P Geerlings, F De Proft - International Journal of Molecular Sciences, 2002 - mdpi.com
… The step from Quantum Mechanics to Quantum chemistry can in principle be situated in the
… 1928 providing insight into, to quote Pauling, the Nature of the Chemical Bond [3]. However …
… 1928 providing insight into, to quote Pauling, the Nature of the Chemical Bond [3]. However …
Water-mediated base pairs in RNA: a quantum-chemical study
M Brandl, M Meyer, J Sühnel - The Journal of Physical Chemistry …, 2000 - ACS Publications
… In this work we extend this study and report on a comprehensive quantum-chemical
analysis of the geometries and interaction energies of six water-mediated base pairs. …
analysis of the geometries and interaction energies of six water-mediated base pairs. …
[图书][B] Quantum chemistry
T Tsuneda, T Tsuneda - 2014 - Springer
This chapter first presents an overview of the history of quantum chemistry in order to show
how density functional theory (DFT) fits into the field as a whole. In Sect. 1.1, the history of …
how density functional theory (DFT) fits into the field as a whole. In Sect. 1.1, the history of …