… of an 896-base pair region of mitochondrial DNA (… phylogenetic analysis of macaques
using mtDNA sequences. We determined nucleotide sequences of an 896-base pair (bp) region …

… , we determined that the most variable regions were between the cytb1 and cytb2 primer
pairs, the cytb4 and cytb5 primer pairs, and the cytb7 and cytb14 primer pairs (see Irwin et al. (…

… from the general gli DNA alignment with 3 divergent regions removed and from the corresponding
amino acid sequence alignment. For each pair numbers of differences in each class of …

… phylogeny of the order, including 25 species, based on the maximum likelihood analysis of
combined DNA sequence data (4406 base pairs) … mitochondrial gene regions sequenced by …

… No evidence of saturation was noted in paired regions. As was found in the 12S rRNA data
set, a minor amount of transitional saturation was noted in unpaired regions, although not …

… We obtained the nucleotide sequences of a homologous 303-base pair (bp) region of the …
Table 1 presents the percent sequence differences of 12S rRNA between pairs of species and …

… of it can be used for phylogenetic inference. Regions of homologous primary and secondary
… of observed nucleotide differences between the pair by introducing a correction for parallel …

… collect new molecular characters for phylogenetic analysis of … (swamp-eels); the last two
pairs of taxa grouping together, … biases within some positions or regions free to vary. These …

… 10 pairs of compensating nucleotide substitutions. (A pair of nucleotide substitutions are
called compensating when they do not change an intrastrand base pairing in a stem region of …

… molecular data set yet assembled, with two nuclear ribosomal genes (18S rDNA and the D1
region of … In spite of the size of our data set, the phylogenetic signal in the deepest part of the …