Resolving Phylogenetic Relationships for Streptococcus mitis and Streptococcus oralis through Core- and Pan-Genome Analyses
IM Velsko, MS Perez, VP Richards - Genome biology and …, 2019 - academic.oup.com
… We investigated whether pan-genome content could explain species misassignment in S.
mitis and S. oralis, which is potentially related to biochemical characterization of these species…
mitis and S. oralis, which is potentially related to biochemical characterization of these species…
[HTML][HTML] Structure and dynamics of the pan-genome of Streptococcus pneumoniae and closely related species
… phylogenetic analysis, S. pneumoniae is very similar to commensal species of the Mitis
group, in particular Streptococcus mitis, Streptococcus oralis and Streptococcus infantis [1]. …
group, in particular Streptococcus mitis, Streptococcus oralis and Streptococcus infantis [1]. …
Exploring the Genomic Diversity and Cariogenic Differences of Streptococcus mutans Strains Through Pan-Genome and Comparative Genome Analysis
… mutans) isolates were analyzed from the pan-genome perspective. This analysis revealed
that S. mutans has an “open” pan-genome, implying that there are plenty of new genes to be …
that S. mutans has an “open” pan-genome, implying that there are plenty of new genes to be …
Whole genome sequencing as a tool for phylogenetic analysis of clinical strains of Mitis group streptococci
LH Rasmussen, R Dargis, K Højholt… - European Journal of …, 2016 - Springer
… genome sequence (WGS) analysis feasible. With … (pan-genome) in a phylogenetic analysis
or simply focusing on genes present in all strains (core-genome) [38]. Phylogenetic analysis …
or simply focusing on genes present in all strains (core-genome) [38]. Phylogenetic analysis …
Identification of virulence-associated properties by comparative genome analysis of Streptococcus pneumoniae, S. pseudopneumoniae, S. mitis, three S. oralis …
M Kilian, H Tettelin - MBio, 2019 - Am Soc Microbiol
… From a common ancestor, Streptococcus pneumoniae and Streptococcus mitis evolved
in parallel into one of the most important pathogens and a mutualistic colonizer of humans, …
in parallel into one of the most important pathogens and a mutualistic colonizer of humans, …
[HTML][HTML] A pangenome approach for discerning species-unique gene markers for identifications of Streptococcus pneumoniae and Streptococcus pseudopneumoniae
L Gonzales-Siles, R Karlsson, P Schmidt… - Frontiers in cellular …, 2020 - frontiersin.org
… unique genomic markers, using pangenome analyses, for reliable differentiation and … mitis,
which is the next most-closely related species of the Mitis-Group of the genus Streptococcus, …
which is the next most-closely related species of the Mitis-Group of the genus Streptococcus, …
A new perspective on ancient Mitis group streptococcal genetics
… The Streptococcus Mitis group of Viridans streptococci are bacteria which typically inhabit …
Structure and dynamics of the pan-genome of Streptococcus pneumoniae and closely related …
Structure and dynamics of the pan-genome of Streptococcus pneumoniae and closely related …
[HTML][HTML] Pan-genome analysis of Streptococcus suis serotype 2 highlights genes associated with virulence and antibiotic resistance
Y Zhou, T Tu, X Yao, Y Luo, Z Yang, M Ren… - Frontiers in …, 2024 - frontiersin.org
… Pan-genome analysis provides a comprehensive understanding of the overall lineage of …
Subsequently, pan-genome analysis of SS2 revealed that only 1353 genes were shared …
Subsequently, pan-genome analysis of SS2 revealed that only 1353 genes were shared …
[HTML][HTML] Distinct Biological Potential of Streptococcus gordonii and Streptococcus sanguinis Revealed by Comparative Genome Analysis
W Zheng, MF Tan, LA Old, IC Paterson… - Scientific reports, 2017 - nature.com
… the pan-genome analysis. We compared the core genes of Sg and Ss and found they
shared a large set of gene families (1,372), reflecting a high similarity between the two species. …
shared a large set of gene families (1,372), reflecting a high similarity between the two species. …
[PDF][PDF] In silico assessment of virulence factors in strains of Streptococcus oralis and Streptococcus mitis isolated from patients with Infective Endocarditis
XC Nielsen - researchgate.net
… A presence-absence gene matrix based on the pan-genome of 40 clinical S. mitis and S.
oralis strains was constructed in order to gain an impression of co-existing genes among the …
oralis strains was constructed in order to gain an impression of co-existing genes among the …
相关搜索
- pan-genome analyses streptococcus oralis
- pan-genome analysis streptococcus suis serotype
- comparative genome analysis of streptococcus pneumoniae
- pan genome analysis different virulence
- genome analysis streptococcus mutans
- streptococcus sanguinis comparative genome analysis
- streptococcus mitis group
- streptococcus mitis population diversity
- genome sequence analyses streptococcal taxonomy
- streptococcus mitis parallel evolution
- streptococcus mitis higher genetic diversity
- streptococcus mitis virulence factors in strains
- whole genome sequencing streptococcus pneumoniae
- pan-genome analyses phylogenetic relationships
- pan genome analysis genomic diversity
- pan-genome analysis antibiotic resistance