Resolving Phylogenetic Relationships for Streptococcus mitis and Streptococcus oralis through Core- and Pan-Genome Analyses

IM Velsko, MS Perez, VP Richards - Genome biology and …, 2019 - academic.oup.com
… We investigated whether pan-genome content could explain species misassignment in S.
mitis and S. oralis, which is potentially related to biochemical characterization of these species…

[HTML][HTML] Structure and dynamics of the pan-genome of Streptococcus pneumoniae and closely related species

C Donati, NL Hiller, H Tettelin, A Muzzi, NJ Croucher… - Genome biology, 2010 - Springer
… phylogenetic analysis, S. pneumoniae is very similar to commensal species of the Mitis
group, in particular Streptococcus mitis, Streptococcus oralis and Streptococcus infantis [1]. …

Exploring the Genomic Diversity and Cariogenic Differences of Streptococcus mutans Strains Through Pan-Genome and Comparative Genome Analysis

P Meng, C Lu, Q Zhang, J Lin, F Chen - Current microbiology, 2017 - Springer
… mutans) isolates were analyzed from the pan-genome perspective. This analysis revealed
that S. mutans has an “open” pan-genome, implying that there are plenty of new genes to be …

Whole genome sequencing as a tool for phylogenetic analysis of clinical strains of Mitis group streptococci

LH Rasmussen, R Dargis, K Højholt… - European Journal of …, 2016 - Springer
… genome sequence (WGS) analysis feasible. With … (pan-genome) in a phylogenetic analysis
or simply focusing on genes present in all strains (core-genome) [38]. Phylogenetic analysis

Identification of virulence-associated properties by comparative genome analysis of Streptococcus pneumoniae, S. pseudopneumoniae, S. mitis, three S. oralis …

M Kilian, H Tettelin - MBio, 2019 - Am Soc Microbiol
… From a common ancestor, Streptococcus pneumoniae and Streptococcus mitis evolved
in parallel into one of the most important pathogens and a mutualistic colonizer of humans, …

[HTML][HTML] A pangenome approach for discerning species-unique gene markers for identifications of Streptococcus pneumoniae and Streptococcus pseudopneumoniae

L Gonzales-Siles, R Karlsson, P Schmidt… - Frontiers in cellular …, 2020 - frontiersin.org
… unique genomic markers, using pangenome analyses, for reliable differentiation and … mitis,
which is the next most-closely related species of the Mitis-Group of the genus Streptococcus, …

A new perspective on ancient Mitis group streptococcal genetics

S Belman, C Chaguza, N Kumar, S Lo… - Microbial …, 2022 - microbiologyresearch.org
… The Streptococcus Mitis group of Viridans streptococci are bacteria which typically inhabit …
Structure and dynamics of the pan-genome of Streptococcus pneumoniae and closely related …

[HTML][HTML] Pan-genome analysis of Streptococcus suis serotype 2 highlights genes associated with virulence and antibiotic resistance

Y Zhou, T Tu, X Yao, Y Luo, Z Yang, M Ren… - Frontiers in …, 2024 - frontiersin.org
Pan-genome analysis provides a comprehensive understanding of the overall lineage of …
Subsequently, pan-genome analysis of SS2 revealed that only 1353 genes were shared …

[HTML][HTML] Distinct Biological Potential of Streptococcus gordonii and Streptococcus sanguinis Revealed by Comparative Genome Analysis

W Zheng, MF Tan, LA Old, IC Paterson… - Scientific reports, 2017 - nature.com
… the pan-genome analysis. We compared the core genes of Sg and Ss and found they
shared a large set of gene families (1,372), reflecting a high similarity between the two species. …

[PDF][PDF] In silico assessment of virulence factors in strains of Streptococcus oralis and Streptococcus mitis isolated from patients with Infective Endocarditis

XC Nielsen - researchgate.net
… A presence-absence gene matrix based on the pan-genome of 40 clinical S. mitis and S.
oralis strains was constructed in order to gain an impression of co-existing genes among the …