… As the pan-genome analysis study suggested the plasticity of the Streptococcus genomes, I
… Additionally, they successfully classified the species of oral streptococci Mitis group into the …

… or Streptococcus pneumoniae. This unexpected finding led to the introduction of the concept
of the pan-genome, … The pan-genome is usually much larger than the genome of any single …

… 1 based on the pan-genome indicates that differences may occur between subspecies other
than in the core-genes. By using a sequence identity percentage >40 % at protein level, few …

… For pan-genome analysis starting from one single genome to 138 genomes, genomes
were added 1000 times in a randomized order without replacement at each fixed number of …

… Intriguingly, phylogenetic analysis shows that … Streptococcus mitis strains, with which humans
live in harmony. In a comparative analysis of 35 genomes, including phylogenetic analyses …

… Furthermore, the impact of each additional genome on the size of the pan genome is greater
for S. mitis than S. pneumoniae (Fig 1A). This is independent of any pairwise SNV cut-off …

… This thesis describes methods for pan-genome analysis and application of pan-genome
content for taxonomy prediction. The thesis consists of an introduction and a collection of VIII …

… The pan-genome in the 17 isolates was first determined using Roary 23 with the cut-off for
… distinct pan-genome distribution and as a result were excluded from subsequent analysis (…

… The goal of this study is to look at the involvement of Streptococcus sanguinis in … The pan
genome method was used in this investigation to identify therapeutic targets for Streptococcus …

… Pan-genome analysis provides a comprehensive understanding of the overall lineage of …
Subsequently, pan-genome analysis of SS2 revealed that only 1353 genes were shared …