Comparative Genomics of the Bacterial Genus Streptococcus Illuminates Evolutionary Implications of Species Groups

XY Gao, XY Zhi, HW Li, HP Klenk, WJ Li - PloS one, 2014 - journals.plos.org
… For pan-genome analysis starting from one single genome to 138 genomes, genomes
were added 1000 times in a randomized order without replacement at each fixed number of …

Genomic Features and Comparative Genomic Analysis of Streptococcus sp. v1. nov., Isolated from an Endophthalmitis Patient

M Zheng, Y Kang, Y Shen, Y Xu, F Xu, Y Chen - Current Microbiology, 2023 - Springer
… The Core–pan-genome analysis was done using the Bacterial Pan Genome Analysis (BPGA) …
For variation analysis, we used Streptococcus mitis SK321 as the reference strain. Single …

Similar genomic patterns of clinical infective endocarditis and oral isolates of Streptococcus sanguinis and Streptococcus gordonii

KH Iversen, LH Rasmussen, K Al-Nakeeb… - Scientific Reports, 2020 - nature.com
… Therefore, the size of the pan-genome is … Mitis group streptococci clinical isolates from
six different species, where 591 core-genes were identified 48 . By investigating the pan-genome

Analysis of Streptococcus agalactiae pan-genome for prevalence, diversity and functionality of integrative and conjugative or mobilizable elements integrated in the …

A Puymège, S Bertin, G Guédon, S Payot - Molecular genetics and …, 2015 - Springer
… Search of genomic islands integrated in the tRNA Lys CTT gene in the pan-genome of S. …
in Streptococcus agalactiae Many tandems of elements were detected during this analysis

… analyses, and proposed reclassification of Streptococcus dentisani as Streptococcus oralis subsp. dentisani comb. nov., Streptococcus tigurinus as Streptococcus …

A Jensen, CFP Scholz, M Kilian - International journal of …, 2016 - microbiologyresearch.org
Mitis group of the genus streptococci using 195 available genomes in a comparative phylogenetic
analysis … (ANI) and in silico and in vitro analyses of specific phenotypic characteristics. …

[PDF][PDF] Similar genomic patterns of clinical infective endocarditis and oral isolates of Streptococcus sanguinis and Streptococcus gordonii

JJA Armenteros, CS Jensen, R Dargis - core.ac.uk
… study of 80 Mitis group streptococci clinical isolates from six … By investigating the pan-genome
we hoped to identify genes … of streptococcus oralis and Streptococcus mitis isolated from …

Pan-genomics of veterinary pathogens and its applications

T de Jesus Sousa, AK Jaiswal, RE Hurtado… - … , Challenges, and Future …, 2020 - Elsevier
Pan-genome is an approach that contributes to the research of … Streptococcus agalactiae,
by the researcher Tettelin and collaborators [1]. In this work, they define the pan-genome as a …

Relationships among streptococci from the mitis group, misidentified as Streptococcus pneumoniae

E Sadowy, A Bojarska, A Kuch, A Skoczyńska… - European Journal of …, 2020 - Springer
… (rMLST) scheme and core-genome analysis, clearly separated investigated isolates from S.
streptococci, associated with the Streptococcus pseudopneumoniae and Streptococcus mitis

Population genomics of an accidental pathogen Streptococcus mitis from patients with bloodstream infection and infective endocarditis in the UK and Ireland

A Kalizang'oma, D Richard, B Kwambana-Adams… - 2023 - researchsquare.com
analyses to assess the abundance of all the functionally characterised (or known) and
hypothetical genes in the S. mitis pangenome … inferred from pan-genome clustering analysis using …

Comparative genomic analysis of the emerging pathogen Streptococcus pseudopneumoniae: novel insights into virulence determinants and identification of a novel …

G Garriss, P Nannapaneni, AS Simões, S Browall… - BioRxiv, 2018 - biorxiv.org
… We defined the pan-genome of these two species using the 44 S. pseudopneumoniae
genomes and 39 completed and fully-annotated S. pneumoniae NCBI genomes (Table S3). …