[PDF][PDF] X. Genotyping of Plasmodium falciparum parasites

G Snounou, A Färnert - Methods in malaria research, 2008 - academia.edu
… with specific primers in a second nested PCR. The amplification strategy used for genotyping
P. falciparum parasites is the nested PCR. In the first amplification reaction oligonucleotide …

Genome-wide SNP genotyping highlights the role of natural selection in Plasmodium falciparumpopulation divergence

…, SF Schaffner, SK Volkman, D Park, P Montgomery… - Genome biology, 2008 - Springer
… the results of PCR-based assays of high frequency SNPs (data not shown). Genotyping data
from these … We expect the genotyping data from mixed samples to predominantly reflect the …

Analysis of Plasmodium falciparum infections in a village community in Northern Nigeria: determination of msp2 genotypes and parasite-specific IgG responses

F Engelbrecht, E Tögel, HP Beck, F Enwezor, A Oettli… - Acta tropica, 2000 - Elsevier
… blood samples from 104 asymptomatic persons from a malaria-endemic village in Northern
Nigeria aged between 5 and 70 years by PCR-RFLP for the msp2 genotypes of their P. …

Genetic Polymorphism of msp1 and msp2 in Plasmodium falciparum Isolates from Côte d'Ivoire versus Gabon

W Yavo, A Konaté, DP Mawili-Mboumba… - Journal of …, 2016 - Wiley Online Library
… The complexity of infection and the frequency of multiple infections were calculated by
combining the msp1 and msp2 PCR genotyping results. The highest number of bands detected, …

The role of pfmdr1 in Plasmodium falciparum tolerance to artemether‐lumefantrine in Africa

C Sisowath, PE Ferreira, LY Bustamante… - Tropical Medicine & …, 2007 - Wiley Online Library
… Reinfections were defined as the absence of matching bands either after pfmsp2 or pfmsp1
genotyping. A negative PCR result on either pfmsp2 or pfmsp1 analysis was considered as …

Real-time PCR for chloroquine sensitivity assay and for pfmdr1–pfcrt single nucleotide polymorphisms in Plasmodium falciparum

F de Monbrison, D Raynaud… - Journal of …, 2003 - Elsevier
… the genotyping of the major polymorphisms of pfmdr1 and pfcrt genes using rapid-cycle PCR
and … drug resistance of large number of samples at the phenotypic and genotypic levels. …

Rapid, field-deployable method for genotyping and discovery of single-nucleotide polymorphisms associated with drug resistance in Plasmodium falciparum

R Daniels, D Ndiaye, M Wall, J McKinney… - Antimicrobial agents …, 2012 - Am Soc Microbiol
genotyping assays using high-resolution melting (HRM) analysis to detect molecular biomarkers
associated with drug resistance across six genes in Plasmodium falciparum. … PCR using …

[HTML][HTML] Plasmodium falciparum genotype population dynamics in asymptomatic children from Senegal

…, C Boudin, N Fievet, P Ndiaye, P Deloron - Microbes and …, 2006 - Elsevier
… genetically distinct Plasmodium falciparum parasite populations. … densities and circulating
genotypes in asymptomatic Senegalese … falciparum, both by microscopy and PCR, while other …

[HTML][HTML] Effects of Plasmodium falciparum mixed infections on in vitro antimalarial drug tests and genotyping

S Liu, J Mu, H Jiang, X Su - The American journal of tropical …, 2008 - ncbi.nlm.nih.gov
… Studying drug resistance in Plasmodium falciparum requires … infections; infections with
single genotype or having a minor … mixtures correlated with genotypes using polymerase chain …

Characterization of Within-Host Plasmodium falciparum Diversity Using Next-Generation Sequence Data

S Auburn, S Campino, O Miotto, AA Djimde, I Zongo… - PloS one, 2012 - journals.plos.org
… Here, using PCR at the msp1 and 2 loci, we explore the relationship between the traditional
falciparum entails MOI estimation using genotype data from the msp-1 and -2 loci [20]. This …