Analysis of Plasmodium falciparum diversity in natural infections by deep sequencing

…, I Zongo, JB Ouedraogo, P Michon, I Mueller, P Siba… - Nature, 2012 - nature.com
… -scale analysis of genetic variation in Plasmodium falciparum by deep sequencing of parasite
… genome has several unusual features that greatly complicate sequence analysis, such as …

Analysis of sequences from the extremely A+ T-rich genome of Plasmodium falciparum

JL Weber - Gene, 1987 - Elsevier
… In this report, ail available nucleotide sequences from P. fak@arum have been analyzed to
give base composition, codon usage and dinucleotide frequencies. Such information can be …

Analysis of sequence diversity in the Plasmodium falciparum merozoite surface protein-1 (MSP-1)

LH Miller, T Roberts, M Shahabuddin… - Molecular and …, 1993 - Elsevier
analyze all MSP-1 sequences to … analysis of published sequences was to determine the
variability among various clones for planning and interpretation of vaccine studies. The analysis

Sub-grouping of Plasmodium falciparum 3D7 var genes based on sequence analysis of coding and non-coding regions

T Lavstsen, A Salanti, ATR Jensen, DE Arnot… - Malaria journal, 2003 - Springer
Background The variant surface antigen family Plasmodium falciparum erythrocyte membrane
protein-1 (PfEMP1) is an important target for protective immunity and is implicated in the …

Analysis of expressed sequence tags from Plasmodium falciparum

D Chakrabarti, GR Reddy, JB Dame, EC Almira… - Molecular and …, 1994 - Elsevier
… quences of Plasmodium falciparum, we have initiated single pass sequencing of randomly
… Using a similar approach of sequencing random cDNA clones, transcribed sequences have …

Molecular cloning and sequence analysis of the Plasmodium falciparum dihydrofolate reductase-thymidylate synthase gene.

DJ Bzik, WB Li, T Horii… - Proceedings of the …, 1987 - National Acad Sciences
… strain of Plasmodium falciparum were isolated and sequenced. The deduced DHFR-TS
protein contained 608 amino acids (71,682 Da). The coding region for DHFR-TS contained no …

Resistance to antifolates in Plasmodium falciparum monitored by sequence analysis of dihydropteroate synthetase and dihydrofolate reductase alleles in a large …

P Wang, CS Lee, R Bayoumi, A Djimde… - Molecular and …, 1997 - Elsevier
… We have thus examined by DNA sequence analysis 141 field samples from several
geographical regions with differing Fansidar usage (West and East Africa, the Middle East and Viet …

Sequence analysis of Plasmodium falciparum cytochrome b in multiple geographic sites

MT Ekala, N Khim, E Legrand, M Randrianarivelojosia… - Malaria Journal, 2007 - Springer
Background The antimalarial drug atovaquone specifically targets Plasmodium falciparum
cytochrome b (Pfcytb), a mitochondrial gene with uniparental inheritance. Cases of resistance …

Population structure and recent evolution of Plasmodium falciparum

SM Rich, FJ Ayala - … of the National Academy of Sciences, 2000 - National Acad Sciences
… We analyze three antigenic genes known to be extremely polymorphic: Csp, Msp-1, and …
The gene sequences analyzed derive from isolates of P. falciparum geographically …

Sequence analysis of coding DNA fragments of pfcrt and pfmdr-1 genes in Plasmodium falciparum isolates from Odisha, India

SKD Sutar, B Gupta, M Ranjit, SK Kar… - Memórias do Instituto …, 2011 - SciELO Brasil
… Here, we present DNA sequence analyses of both the second exon of the Plasmodium
falciparum CQ-… Here, we present DNA sequence analyses of both the second exon of the …