Reciprocal silencing, transcriptional bias and functional divergence of homeologs in polyploid cotton (Gossypium)

B Chaudhary, L Flagel, RM Stupar, JA Udall… - Genetics, 2009 - academic.oup.com
polyploid evolution than polyploidy alone, corroborating the foregoing result. Alternatively,
some of the above observations could be due to the divergence … natural allopolyploid cotton. …

Expression patterns and functional divergence of homologous genes accompanied by polyploidization in cotton (Gossypium hirsutum L.)

Z Peng, H Cheng, G Sun, Z Pan, X Wang… - Science China Life …, 2020 - Springer
polyploid cotton adaptability, including more phenotypic … reference for understanding
polyploid crop breeding. … bias and functional divergence of homeologs in polyploid cotton (…

Evolutionary divergence of duplicated genomes in newly described allotetraploid cottons

R Peng, Y Xu, S Tian, T Unver, Z Liu… - Proceedings of the …, 2022 - National Acad Sciences
… both the evolutionary consequences of polyploidy and of parallel domestication (19–21). …
cottons, and reevaluate phylogenetic relationships and divergence times within the polyploid

Genomic diversifications of five Gossypium allopolyploid species and their impact on cotton improvement

ZJ Chen, A Sreedasyam, A Ando, Q Song… - Nature …, 2020 - nature.com
… Using the diploid 20,21 and 5 polyploid cotton genomes, we estimated divergence at 58–59
Ma between Gossypium and its relative Theobroma cacao (Extended Data Fig. 3a and …

[HTML][HTML] Comparative genomic analyses reveal cis-regulatory divergence after polyploidization in cotton

J You, M Lin, Z Liu, L Pei, Y Long, L Tu, X Zhang… - The Crop Journal, 2022 - Elsevier
… pattern divergence of genes involved in fiber development (fiber-related genes). Our findings
reveal the regulatory divergence of the transcriptional network in cotton … In polyploids, gene …

Cotton genome evolution and features of its structural and functional organization

S Ksenia, K Elena, P Larisa - Biological Communications, 2020 - cyberleninka.ru
… evolution and the influence of polyploidy on gene expression. … species), and the functional
divergence of duplicated copies of … were shown to dominate in polyploid cotton, ie, both the …

Cotton duplicated genes produced by polyploidy show significantly elevated and unbalanced evolutionary rates, overwhelmingly perturbing gene tree topology

F Meng, Y Pan, J Wang, J Yu, C Liu, Z Zhang… - Frontiers in …, 2020 - frontiersin.org
… Furthermore, as to both branch and site models, we inferred that positive natural selection
during the divergence of fiber-development-related MYB genes was likely, and found that the …

Genomic insights into divergence and dual domestication of cultivated allotetraploid cottons

L Fang, H Gong, Y Hu, C Liu, B Zhou, T Huang… - Genome Biology, 2017 - Springer
… We resequence the genomes of 147 cotton accessions, including diverse wild relatives, …
bases for improving cotton production and for further evolution analysis of polyploid crops. …

Genome-wide chromatin accessibility analysis unveils open chromatin convergent evolution during polyploidization in cotton

J Han, D Lopez-Arredondo, G Yu… - Proceedings of the …, 2022 - National Acad Sciences
… Allopolyploidization resulting in divergent genomes in a single … , which could be detrimental
to newly formed polyploidy (5, 6). … Here, we revealed that in polyploid cotton, nearly 20% of …

Salt‐tolerance diversity in diploid and polyploid cotton (Gossypium) species

Y Dong, G Hu, J Yu, SW Thu, CE Grover… - The Plant …, 2020 - Wiley Online Library
… or how the merging of divergent genomes into a common … Here, we measured the response
of four polyploid cotton … tolerance with polyploidy, we found that most tetraploid cottons did …