Reciprocal silencing, transcriptional bias and functional divergence of homeologs in polyploid cotton (Gossypium)
… polyploid formation. We demonstrate that 40% of homeologs are transcriptionally biased in
at least one stage of cotton … We describe the scope of transcriptional subfunctionalization and …
at least one stage of cotton … We describe the scope of transcriptional subfunctionalization and …
Polyploidy and the petal transcriptome of Gossypium
… bias was conserved in natural and recent polyploids of cotton. Conservation of direction of
bias … increased expression in the polyploid was due to an increase of transcription levels in a …
bias … increased expression in the polyploid was due to an increase of transcription levels in a …
Homoeolog expression bias and expression level dominance in allopolyploid cotton
… bias and expression level dominance by parsing expression patterns of leaf transcriptomes
in hybrid and polyploid cottons, and … Reciprocal silencing, transcriptional bias and functional …
in hybrid and polyploid cottons, and … Reciprocal silencing, transcriptional bias and functional …
Extensive and Biased Intergenomic Nonreciprocal DNA Exchanges Shaped a Nascent Polyploid Genome, Gossypium (Cotton)
… Allelic changes in polyploid cotton. (A) Allelic changes … of intergenomic conversion in polyploid
cotton. The proportion of … of gene conversions following polyploid cotton formation (Figure …
cotton. The proportion of … of gene conversions following polyploid cotton formation (Figure …
[HTML][HTML] Comparative genomic analyses reveal cis-regulatory divergence after polyploidization in cotton
J You, M Lin, Z Liu, L Pei, Y Long, L Tu, X Zhang… - The Crop Journal, 2022 - Elsevier
… of the transcriptional network in cotton after polyploidization and … genes mediated by cis-regulatory
elements in polyploids. … pairs maintain the same expression bias mode relative to the …
elements in polyploids. … pairs maintain the same expression bias mode relative to the …
A transcriptome profile for developing seed of polyploid cotton
R Hovav, A Faigenboim‐Doron, N Kadmon… - The Plant …, 2015 - Wiley Online Library
… We present global transcriptome analyses of cotton seed development using … In cotton
seed, LAR is strongly biased toward the Dt homeolog in one gene pair, but is moderately biased …
seed, LAR is strongly biased toward the Dt homeolog in one gene pair, but is moderately biased …
Expression patterns and functional divergence of homologous genes accompanied by polyploidization in cotton (Gossypium hirsutum L.)
Z Peng, H Cheng, G Sun, Z Pan, X Wang… - Science China Life …, 2020 - Springer
… Specifically, ELD-A/D and homologous expression bias in the allopolyploid cotton were …
silencing, transcriptional bias and functional divergence of homeologs in polyploid cotton (…
silencing, transcriptional bias and functional divergence of homeologs in polyploid cotton (…
Histone modifications define expression bias of homoeologous genomes in allotetraploid cotton
D Zheng, W Ye, Q Song, F Han, T Zhang… - Plant …, 2016 - academic.oup.com
… for biased homoeologous gene expression in polyploids. We examined H3K4me3 density
and transcriptome maps in root-tip cells of allotetraploid cotton (… of transcriptionally active …
and transcriptome maps in root-tip cells of allotetraploid cotton (… of transcriptionally active …
Genomic diversifications of five Gossypium allopolyploid species and their impact on cotton improvement
… polyploids have fewer gene losses with no subgenomic bias. … different biological functions
and transcription factors enriched in … the recombination landscapes in polyploid cottons, we …
and transcription factors enriched in … the recombination landscapes in polyploid cottons, we …
Polyploidy and small RNA regulation of cotton fiber development
… transcription factors that are required for the initiation of leaf trichomes in Arabidopsis and of
seed fibers in cotton… such as fibers during the selection and domestication of polyploid crops. …
seed fibers in cotton… such as fibers during the selection and domestication of polyploid crops. …
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