Prediction of peptide-MHC binding using profiles
PA Reche, EL Reinherz - … : predicting immunogenicity in silico, 2007 - Springer
… those peptides presented by MHC molecules, prediction of peptides that can bind to MHC
molecules is … Peptides binding to MHC molecules must fit into a specific chemical and physical …
molecules is … Peptides binding to MHC molecules must fit into a specific chemical and physical …
[HTML][HTML] Methods for prediction of peptide binding to MHC molecules: a comparative study
… prediction method depends on the amount of available data (the number of peptides of known
binding affinity to the MHC molecule of … intended purpose of the prediction (screening of a …
binding affinity to the MHC molecule of … intended purpose of the prediction (screening of a …
Enhancement to the RANKPEP resource for the prediction of peptide binding to MHC molecules using profiles
PA Reche, JP Glutting, H Zhang, EL Reinherz - Immunogenetics, 2004 - Springer
… peptide binding predictions across different MHC molecules with respect to the training set
size should be approached with caution. For MHC molecules with only a few known peptide …
size should be approached with caution. For MHC molecules with only a few known peptide …
Prediction of MHC-peptide binding: a systematic and comprehensive overview
EM Lafuente, PA Reche - Current pharmaceutical design, 2009 - ingentaconnect.com
… MHC-peptide binding. Many models and methods have been developed to predict peptide
binding to MHC molecules… QMs for predicting peptide binding to MHC molecules have also …
binding to MHC molecules… QMs for predicting peptide binding to MHC molecules have also …
Immunoinformatics: predicting peptide–MHC binding
… state-of-the-art methods, that have allowed for accurate predictions of peptide binding of all
MHC molecules, even including those that have not yet been characterized experimentally. …
MHC molecules, even including those that have not yet been characterized experimentally. …
Prediction of MHC class I binding peptides using profile motifs
PA Reche, JP Glutting, EL Reinherz - Human immunology, 2002 - Elsevier
… Therefore, prediction of peptides that can bind to MHC molecules is important for … for MHC
class I [6]. In this article, we will focus on prediction of peptide binding to MHCI molecules. …
class I [6]. In this article, we will focus on prediction of peptide binding to MHCI molecules. …
Structural prediction of peptides binding to MHC class I molecules
HH Bui, AJ Schiewe, H von Grafenstein… - Proteins: Structure …, 2006 - Wiley Online Library
… of peptide binding affinity with structural features of 266 PePSSI-predicted peptide structures,
… when bound to a class I MHC molecule, and here we have examined peptide binding to …
… when bound to a class I MHC molecule, and here we have examined peptide binding to …
[HTML][HTML] A community resource benchmarking predictions of peptide binding to MHC-I molecules
… of external predictions in all cases. For example, some methods such as syfpeithi do not
aim to specifically predict peptide binding to MHC molecules, but rather naturally processed …
aim to specifically predict peptide binding to MHC molecules, but rather naturally processed …
A review on the methods of peptide-MHC binding prediction
Y Liu, X Ouyang, ZX Xiao, L Zhang… - Current …, 2020 - ingentaconnect.com
… MHC molecules. The binding of the peptide to MHC is the most selective step, so predicting
the binding affinity of the peptide to MHC is the principal step in predicting T cell epitopes. …
the binding affinity of the peptide to MHC is the principal step in predicting T cell epitopes. …
Predicting peptides that bind to MHC molecules using supervised learning of hidden Markov models
H Mamitsuka - Proteins: Structure, Function, and Bioinformatics, 1998 - Wiley Online Library
… Second, we generate peptides that have high probabilities to bind to a certain MHC
molecule, based on our proposed method using peptides binding to MHC molecules as a set of …
molecule, based on our proposed method using peptides binding to MHC molecules as a set of …