… To determine hormone-regulated genes in this widely used prostate cancer cellular model,
we enumerated the number of tags mapped to exons in individual transcripts before and after …

… derived xenograft (PDX) models at the single-cell level. Finally, we show how our Prostate
Cancer Transcriptome Atlas can infer or validate new therapeutic avenues for cancer patients. …

… scores for subjects based on each prediction model, divided subjects into high (poor score)
… patients with prostate cancer (17). To compare performance of different prediction models, …

… analysis of the potential of computer vision models for whole-transcriptome analysis in prostate
cancer has … We therefore conducted a transcriptome-wide analysis of gene expression …

… analysis of whole-genome sequence, detailed clinical history, and transcriptome sequence
of multiple prostate cancer … progression model. Of the 87 mutations that disagreed with the …

… time” in vivo RNA-Seq-based transcriptome analysis of clinical … We identify a
chemotherapy-driven PCa transcriptome profile … been identified in high-risk prostate cancer …

… (NGS) has revolutionized genomic and transcriptomic analysis. … differential expressed
transcripts in prostate cancer using RNA-Seq data. This model identifies transcripts associated …

… The histopathological specimen of the primary prostate tumor was available with sufficient
… analysis in n=23 patients. In this subset of patients, tumor RNA transcriptomic analyses …

… Predictive modeling yielded a restricted probe panel … RNA samples of prostate tissues (8
normal and 16 tumor specimens, Table … TCGA prostate cancer poly(A)–selected RNA-seq and …

… models of clinically significant prostate cancer (csPCa). (A) Development of the collagen
support vector machine (SVM) model … Using transcriptome analysis of collagen-high PCa, we …