RNA‐Seq methods for transcriptome analysis
R Hrdlickova, M Toloue, B Tian - Wiley Interdisciplinary …, 2017 - Wiley Online Library
… analysis of gene expression and several specific applications, including isoform … gene fusion
detection, digital gene expression profiling, targeted sequencing and single-cell analysis. In …
detection, digital gene expression profiling, targeted sequencing and single-cell analysis. In …
Principles of transcriptome analysis and gene expression quantification: an RNA‐seq tutorial
JBW Wolf - Molecular ecology resources, 2013 - Wiley Online Library
… Only a decade ago, the study of gene expression was … gene expression were the only tools
available for examining features of the transcriptome and global patterns of gene expression. …
available for examining features of the transcriptome and global patterns of gene expression. …
[HTML][HTML] Transcriptome analysis uncovers the gene expression profile of salt-stressed potato (Solanum tuberosum L.)
Q Li, Y Qin, X Hu, G Li, H Ding, X Xiong, W Wang - Scientific reports, 2020 - nature.com
… gene expression information for the salt-stress response in S. tuberosum, we analysed the
transcriptome profile of … Therefore, in this study, transcriptome analysis was only performed for …
transcriptome profile of … Therefore, in this study, transcriptome analysis was only performed for …
Integrating transcriptome and proteome profiling: Strategies and applications
… transcriptome and proteome data is low, their joint analysis … about the mRNA-protein
expression dynamics. There are … gene expression and its regulation by integrative analysis of …
expression dynamics. There are … gene expression and its regulation by integrative analysis of …
[HTML][HTML] De novo characterization of a whitefly transcriptome and analysis of its gene expression during development
… Furthermore, we compared the gene expression profiles of whiteflies during … gene expression
system. The assembled, annotated transcriptome sequences and gene expression profiles …
system. The assembled, annotated transcriptome sequences and gene expression profiles …
Expression profile viewer (ExProView): a software tool for transcriptome analysis
… expression profiles derived from expressed sequence tags (ESTs) and SAGE (serial analysis
of gene expression) … a known gene as characterized in the transcript databases Expressed …
of gene expression) … a known gene as characterized in the transcript databases Expressed …
[HTML][HTML] De novo transcriptome characterization and gene expression profiling of the desiccation tolerant moss Bryum argenteum following rehydration
B Gao, D Zhang, X Li, H Yang, Y Zhang, AJ Wood - BMC genomics, 2015 - Springer
… Based on this analysis, the gene expression levels in desiccated and rehydrated libraries
were classified into five categories (rare, low, moderate, high and extremely high) (Fig. 4c). …
were classified into five categories (rare, low, moderate, high and extremely high) (Fig. 4c). …
Bothrops jararaca venom gland transcriptome: analysis of the gene expression pattern
DAP Cidade, TA Simão, AMR Dávila, G Wagner… - Toxicon, 2006 - Elsevier
… In our transcriptome analysis, since we have sequenced a larger number of sequence tags,
we were able to characterize even not abundant transcripts besides the most frequent ones, …
we were able to characterize even not abundant transcripts besides the most frequent ones, …
Transcriptome analysis of channel catfish (Ictalurus punctatus): genes and expression profile from the brain
Z Ju, A Karsi, A Kocabas, A Patterson, P Li, D Cao… - Gene, 2000 - Elsevier
… This could be caused by tissue types since our results with gene expression profiles in the
catfish muscle were similar to those found in the porcine skeletal muscle (Davoli et al., 1999). …
catfish muscle were similar to those found in the porcine skeletal muscle (Davoli et al., 1999). …
[HTML][HTML] Comparison of next generation sequencing technologies for transcriptome characterization
… for gene … analysis, and expression analysis in animal, plant, and microbial species [3]. Other
approaches for analyzing transcriptomes include serial analysis of gene expression (SAGE) […
approaches for analyzing transcriptomes include serial analysis of gene expression (SAGE) […
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