Analyzing yeast protein–protein interaction data obtained from different sources
… proteins, including 39 proteins of unknown function. Our results indicate that existing large-scale
protein interaction data … that integrating many different experimental data sets yields a …
protein interaction data … that integrating many different experimental data sets yields a …
Computational analyses of high-throughput protein-protein interaction data
Y Chen, D Xu - Current protein and peptide science, 2003 - ingentaconnect.com
… data. In this review, we describe several databases that store, query, and visualize protein-protein
interaction data. … yeast two-hybrid assay or protein complex identification through mass …
interaction data. … yeast two-hybrid assay or protein complex identification through mass …
[PDF][PDF] Predicting protein function from protein/protein interaction data: a probabilistic approach
S Letovsky, S Kasif - Bioinformatics, 2003 - bioinformatics.cs.vt.edu
… of molecular interaction networks has made possible new approaches to inferring protein …
analysis of graph neighborhoods in a protein-protein interaction network. The method exploits …
analysis of graph neighborhoods in a protein-protein interaction network. The method exploits …
Prediction of protein function using protein-protein interaction data
… We can also use the predicted protein-protein interactions based on an analytical … protein
interaction data in MIPS. Let Oij be the variable for the observed interaction result for proteins …
interaction data in MIPS. Let Oij be the variable for the observed interaction result for proteins …
An evaluation of human protein-protein interaction data in the public domain
… MIPS Database MIPS database consists of mammalian interaction data manually curated
from the literature [21, 22], and includes experiment type, description of the interaction and …
from the literature [21, 22], and includes experiment type, description of the interaction and …
Protein-protein interaction databases: keeping up with growing interactomes
B Lehne, T Schlitt - Human genomics, 2009 - Springer
… To make this information more readily available, a number of publicly available databases
have set out to collect and store protein-protein interaction data. Protein-protein interactions …
have set out to collect and store protein-protein interaction data. Protein-protein interactions …
A human functional protein interaction network and its application to cancer data analysis
… a positive set due to the incompleteness of our knowledge of protein interactions [56]: just
because two proteins are not known to interact does not mean that this does not in fact occur. …
because two proteins are not known to interact does not mean that this does not in fact occur. …
Assessment of prediction accuracy of protein function from protein–protein interaction data
H Hishigaki, K Nakai, T Ono, A Tanigami, T Takagi - Yeast, 2001 - Wiley Online Library
… we can predict a protein's function from its interaction data. … In summary, protein–protein
interaction data can be a … of uncharacterized proteins, despite the imperfection of these data. …
interaction data can be a … of uncharacterized proteins, despite the imperfection of these data. …
How reliable are experimental protein–protein interaction data?
E Sprinzak, S Sattath, H Margalit - Journal of molecular biology, 2003 - Elsevier
… of correct interactions (true positives (TP)) in experimental protein–protein interaction data
from Saccharomyces … We have assembled a database of the yeast S. cerevisiae interacting …
from Saccharomyces … We have assembled a database of the yeast S. cerevisiae interacting …
iRefWeb: interactive analysis of consolidated protein interaction data and their supporting evidence
B Turner, S Razick, AL Turinsky, J Vlasblom… - Database, 2010 - academic.oup.com
… We present iRefWeb, a web interface to protein interaction data consolidated from 10 public
… interactions for a protein of interest, and presents various statistical summaries of the data …
… interactions for a protein of interest, and presents various statistical summaries of the data …