A comparative pan-genomic analysis of 53 C. pseudotuberculosis strains based on functional domains

JS Bernardes, RJ Eberle, FRJ Vieira… - Journal of …, 2021 - Taylor & Francis
… With this domain analysis, we have identified functional differences among strains of biovars
… The distribution patterns of functional domains identified in this work might have impacts on …

In silico functional prediction of hypothetical proteins from the core genome of Corynebacterium pseudotuberculosis biovar ovis

CL Araújo, I Blanco, L Souza, S Tiwari, LC Pereira… - PeerJ, 2020 - peerj.com
… the identification of structural features as conserved domains and families. Furthermore, we
pseudotuberculosis biovar ovis contains 4,806 genes, where 1,255 are shared by all strains

The YopD Translocator of Yersinia pseudotuberculosis Is a Multifunctional Protein Comprised of Discrete Domains

J Olsson, PJ Edqvist, JE Bröms, A Forsberg… - Journal of …, 2004 - Am Soc Microbiol
… Bacterial strains and plasmids used in this study are listed in Table 1. Unless indicated …
-Bertani agar or broth at either 26C (Yersinia pseudotuberculosis) or 37C (Escherichia coli) with …

Variability in the Functional Domains of the Rho-Modifying Toxins of Yersinia pseudotuberculosis

N Timchenko, R Adgamov, S Ermolaeva - Advances in Yersinia Research, 2012 - Springer
functional domains of plasmid-encoded YopE and chromosome-encoded CNF toxins in Y.
pseudotuberculosis strains … Gene fragments encoding domains involved in the modification of …

Structure of the Y. pseudotuberculosis adhesin InvasinE

P Sadana, M Mönnich, C Unverzagt… - Protein Science, 2017 - Wiley Online Library
… lectin-like domain of Yersinia pseudotuberculosis Invasin and … pseudotuberculosis strain
YPIII and the one from strain IP31758… on the structural and functional characterization of InvE. …

[HTML][HTML] Prediction of new vaccine targets in the core genome of Corynebacterium pseudotuberculosis through omics approaches and reverse vaccinology

CL Araújo, J Alves, W Nogueira, LC Pereira… - Gene, 2019 - Elsevier
pseudotuberculosis strains. Subsequently, through RNA-Seq data of the same abiotic stresses
in two strains, … and, to this day, the function of this domain remains unclear. The same can …

Identification and role in virulence of putative iron acquisition genes from Corynebacterium pseudotuberculosis

SJ Billington, PA Esmay, JG Songer… - FEMS microbiology …, 2002 - academic.oup.com
pseudotuberculosis strains used in this study were derivatives of the caprine isolate, …
Like FepC, FagC has a large ABC transporter domain (InterPro protein [8] database domain: …

Role of Predicted Transmembrane Domains for Type III Translocation, Pore Formation, and Signaling by the Yersinia pseudotuberculosis YopB Protein

MB Ryndak, H Chung, E London… - Infection and …, 2005 - Am Soc Microbiol
… transmembrane domain were constructed. Yersinia pseudotuberculosis strains expressing
pseudotuberculosis strains used in this study (Table 1) are derived from the serogroup 03 Y. …

An integrated structural proteomics approach along the druggable genome of Corynebacterium pseudotuberculosis species for putative druggable targets

LG Radusky, SS Hassan, E Lanzarotti, S Tiwari… - BMC genomics, 2015 - Springer
pseudotuberculosis multi-strain proteome was never performed before. … or domains, leading
to a total of 2455 domains assignments from Pfam-A entries and 509 ORFs with no domain

Comparative genomic analysis between Corynebacterium pseudotuberculosis strains isolated from buffalo

MVC Viana, H Figueiredo, R Ramos, LC Guimaraes… - PLoS …, 2017 - journals.plos.org
pseudotuberculosis strain 31 was used as the reference to compare all the strains isolated
from buffalo, a strong homology was shared across the genes within these genomes. All …