A portable expression resource for engineering cross-species genetic circuits and pathways

M Kushwaha, HM Salis - Nature communications, 2015 - nature.com
Genetic circuits and metabolic pathways can be reengineered to allow organisms to process
signals and manufacture useful chemicals. However, their functions currently rely on …

Metagenomic mining of regulatory elements enables programmable species-selective gene expression

NI Johns, ALC Gomes, SS Yim, A Yang… - Nature …, 2018 - nature.com
Robust and predictably performing synthetic circuits rely on the use of well-characterized
regulatory parts across different genetic backgrounds and environmental contexts. Here we …

Sensitive cells: enabling tools for static and dynamic control of microbial metabolic pathways

BF Cress, EA Trantas, F Ververidis, RJ Linhardt… - Current opinion in …, 2015 - Elsevier
Highlights•Recently developed genome engineering tools facilitate pathway control.•Novel
genetic regulators enable multi-level static and dynamic control.•State-of-the-art applications …

Synthetic biology: tools to design microbes for the production of chemicals and fuels

SW Seo, J Yang, BE Min, S Jang, JH Lim, HG Lim… - Biotechnology …, 2013 - Elsevier
The engineering of biological systems to achieve specific purposes requires design tools
that function in a predictable and quantitative manner. Recent advances in the field of …

Diversity, versatility and complexity of bacterial gene regulation mechanisms: opportunities and drawbacks for applications in synthetic biology

I Bervoets, D Charlier - FEMS microbiology reviews, 2019 - academic.oup.com
Gene expression occurs in two essential steps: transcription and translation. In bacteria, the
two processes are tightly coupled in time and space, and highly regulated. Tight regulation …

Engineering prokaryotic gene circuits

K Michalodimitrakis, M Isalan - FEMS microbiology reviews, 2008 - academic.oup.com
Engineering of synthetic gene circuits is a rapidly growing discipline, currently dominated by
prokaryotic transcription networks, which can be easily rearranged or rewired to give …

Rational engineering of synthetic microbial systems: from single cells to consortia

P Bittihn, MO Din, LS Tsimring, J Hasty - Current opinion in microbiology, 2018 - Elsevier
Highlights•Synthetic biology approaches enable microbial systems engineering.•Versatile
tools rapidly expand regulatory engineering capabilities.•Modular components and …

Expanding the synthetic biology toolbox: engineering orthogonal regulators of gene expression

CV Rao - Current opinion in biotechnology, 2012 - Elsevier
Despite substantial progress in synthetic biology, we still lack the ability to engineer anything
as complex as Nature has. One of the many reasons is that we lack the requisite tools for …

Engineering microbial systems to explore ecological and evolutionary dynamics

Y Tanouchi, RP Smith, L You - Current opinion in biotechnology, 2012 - Elsevier
A major goal of biological research is to provide a mechanistic understanding of diverse
biological processes. To this end, synthetic biology offers a powerful approach, whereby …

Orthogonality and Burdens of Heterologous AND Gate Gene Circuits in E. coli

Q Liu, J Schumacher, X Wan, C Lou… - ACS synthetic …, 2018 - ACS Publications
Synthetic biology approaches commonly introduce heterologous gene networks into a host
to predictably program cells, with the expectation of the synthetic network being orthogonal …