Development of a versatile resource for post-genomic research through consolidating and characterizing 1500 diverse wild and cultivated soybean genomes

H Zhang, H Jiang, Z Hu, Q Song, YC An - BMC genomics, 2022 - Springer
Background With advances in next-generation sequencing technologies, an unprecedented
amount of soybean accessions has been sequenced by many individual studies and made …

[HTML][HTML] Pan-genome of wild and cultivated soybeans

Y Liu, H Du, P Li, Y Shen, H Peng, S Liu, GA Zhou… - Cell, 2020 - cell.com
Soybean is one of the most important vegetable oil and protein feed crops. To capture the
entire genomic diversity, it is needed to construct a complete high-quality pan-genome from …

Recent developments of genomic research in soybean

C Chan, X Qi, MW Li, FL Wong, HM Lam - Journal of Genetics and …, 2012 - Elsevier
Soybean is an important cash crop with unique and important traits such as the high seed
protein and oil contents, and the ability to perform symbiotic nitrogen fixation. A reference …

Landscape of genomic diversity and trait discovery in soybean

B Valliyodan, D Qiu, G Patil, P Zeng, J Huang, L Dai… - Scientific reports, 2016 - nature.com
Cultivated soybean [Glycine max (L.) Merr.] is a primary source of vegetable oil and protein.
We report a landscape analysis of genome-wide genetic variation and an association study …

Genome assembly of the popular Korean soybean cultivar Hwangkeum

MS Kim, T Lee, J Baek, JH Kim, C Kim, SC Jeong - G3, 2021 - academic.oup.com
Massive resequencing efforts have been undertaken to catalog allelic variants in major crop
species including soybean, but the scope of the information for genetic variation often …

SoySNP618K array: a high‐resolution single nucleotide polymorphism platform as a valuable genomic resource for soybean genetics and breeding

YF Li, YH Li, SS Su, JC Reif, ZM Qi… - Journal of Integrative …, 2022 - Wiley Online Library
Innovations in genomics have enabled the development of low‐cost, high‐resolution, single
nucleotide polymorphism (SNP) genotyping arrays that accelerate breeding progress and …

Developing an SNP dataset for efficiently evaluating soybean germplasm resources using the genome sequencing data of 3,661 soybean accessions

Y Niu, WS Yung, CC Sze, FL Wong, MW Li, G Chung… - BMC genomics, 2024 - Springer
Background Single nucleotide polymorphism (SNP) markers play significant roles in
accelerating breeding and basic crop research. Several soybean SNP panels have been …

Genetic and genomic resources for soybean breeding research

J Petereit, JI Marsh, PE Bayer, MF Danilevicz… - Plants, 2022 - mdpi.com
Soybean (Glycine max) is a legume species of significant economic and nutritional value.
The yield of soybean continues to increase with the breeding of improved varieties, and this …

Eight soybean reference genome resources from varying latitudes and agronomic traits

JSC Chu, B Peng, K Tang, X Yi, H Zhou, H Wang, G Li… - Scientific Data, 2021 - nature.com
Comparative analysis of multiple reference genomes representing diverse genetic
backgrounds is critical for understanding the role of key alleles important in domestication …

Sequencing the USDA core soybean collection reveals gene loss during domestication and breeding

PE Bayer, B Valliyodan, H Hu, JI Marsh… - The plant …, 2022 - Wiley Online Library
The gene content of plants varies between individuals of the same species due to gene
presence/absence variation, and selection can alter the frequency of specific genes in a …