Improving the analysis of low heritability complex traits for enhanced genetic gain in potato

AT Slater, GM Wilson, NOI Cogan, JW Forster… - Theoretical and applied …, 2014 - Springer
Key message Best linear unbiased prediction (BLUP), which uses pedigree to estimate
breeding values, can result in increased genetic gains for low heritability traits in …

[HTML][HTML] Prediction based on estimated breeding values using genealogy for tuber yield and late blight resistance in auto-tetraploid potato (Solanum tuberosum L.)

S Sood, V Bhardwaj, SK Kaushik, S Sharma - Heliyon, 2020 - cell.com
Estimated breeding values using best linear unbiased prediction (BLUP) through pedigree
relationship can enhance selection efficiency and save time as well as resources in …

Genetic variance partitioning and genome-wide prediction with allele dosage information in autotetraploid potato

JB Endelman, CAS Carley, PC Bethke, JJ Coombs… - Genetics, 2018 - academic.oup.com
As one of the world's most important food crops, the potato (Solanum tuberosum L.) has
spurred innovation in autotetraploid genetics, including in the use of SNP arrays to …

Improving breeding efficiency in potato using molecular and quantitative genetics

AT Slater, NOI Cogan, BJ Hayes, L Schultz… - Theoretical and applied …, 2014 - Springer
Key message Potatoes are highly heterozygous and the conventional breeding of superior
germplasm is challenging, but use of a combination of MAS and EBVs can accelerate …

Making the most of all data: combining non‐genotyped and genotyped potato individuals with HBLUP

S Sood, Z Lin, B Caruana, AT Slater… - The Plant …, 2020 - Wiley Online Library
Using genomic information to predict phenotypes can improve the accuracy of estimated
breeding values and can potentially increase genetic gain over conventional breeding. In …

The power of genomic estimated breeding values for selection when using a finite population size in genetic improvement of tetraploid potato

C Selga, F Reslow, P Pérez-Rodríguez, R Ortiz - G3, 2022 - academic.oup.com
Potato breeding relies heavily on visual phenotypic scoring for clonal selection. Obtaining
robust phenotypic data can be labor intensive and expensive, especially in the early cycles …

Improving genetic gain with genomic selection in autotetraploid potato

AT Slater, NOI Cogan, JW Forster, BJ Hayes… - The plant …, 2016 - Wiley Online Library
Potato (Solanum tuberosum L.) breeders consider a large number of traits during cultivar
development and progress in conventional breeding can be slow. There is accumulating …

[HTML][HTML] Prospects and potential uses of genomic prediction of key performance traits in tetraploid potato

B Stich, D Van Inghelandt - Frontiers in plant science, 2018 - frontiersin.org
Genomic prediction is a routine tool in breeding programs of most major animal and plant
species. However, its usefulness for potato breeding has not yet been evaluated in detail …

[HTML][HTML] Sequencing depth and genotype quality: accuracy and breeding operation considerations for genomic selection applications in autopolyploid crops

DC Gemenet, H Lindqvist-Kreuze, B De Boeck… - Theoretical and Applied …, 2020 - Springer
Key message Polypoid crop breeders can balance resources between density and
sequencing depth, dosage information and fewer highly informative SNPs recommended …

[HTML][HTML] Efficient genomic prediction of yield and dry matter in hybrid potato

J Adams, M de Vries, F van Eeuwijk - Plants, 2023 - mdpi.com
There is an ongoing endeavor within the potato breeding sector to rapidly adapt potato from
a clonal polyploid crop to a diploid hybrid potato crop. While hybrid breeding allows for the …